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SCNpilot_expt_300_bf_scaffold_1270_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1270_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(55..408)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G594_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86440.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_1270_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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760..1608
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI0002E2D152
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EED65881.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
IclR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1270_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2101..2655
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH7_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED65880.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
UPF0065 protein in clcB-clcD intergenic region-like
SCNpilot_expt_300_bf_scaffold_1270_curated_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2672..3469
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH6_COMTE
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EED65879.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_300_bf_scaffold_1270_curated_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3466..4959
DNA (1494bp) protein (498aa)
aldehyde dehydrogenase n=1 Tax=Comamonas testosteroni RepID=UPI0003817CBC
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EED65878.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase-like
SCNpilot_expt_300_bf_scaffold_1270_curated_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5300..6004)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI0002DCADD5
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EED65877.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1270_curated_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6001..7518)
DNA (1518bp) protein (506aa)
Carotenoid oxygenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH3_COMTE
Carotenoid oxygenase {ECO:0000313|EMBL:EED65876.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
carotenoid oxygenase
SCNpilot_expt_300_bf_scaffold_1270_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7544..8515)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7WWH2_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED65875.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
UPF0065 protein in tcbD-tcbE intergenic region-like
SCNpilot_expt_300_bf_scaffold_1270_curated_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8563..9006)
DNA (444bp) protein (148aa)
Alpha/beta hydrolase fold protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH1_COMTE
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EED65874.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 2-like
Displaying 9 items

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