ggKbase home page

SCNpilot_expt_300_bf_scaffold_1775_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1775_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28..309)
DNA (282bp) protein (94aa)
30S ribosomal protein S18 n=4 Tax=Comamonadaceae RepID=RS18_ACIAC
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_1775_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(329..622)
DNA (294bp) protein (98aa)
Single-strand binding protein/Primosomal replication protein n n=2 Tax=Alicycliphilus denitrificans RepID=E8TYE7_ALIDB
single-strand binding protein/Primosomal replication protein n; K02686 primosomal replication protein N
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_1775_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(648..1022)
DNA (375bp) protein (125aa)
30S ribosomal protein S6 n=2 Tax=Alicycliphilus denitrificans RepID=E8TYE8_ALIDB
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_1775_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1258..1800
DNA (543bp) protein (181aa)
Protein GrpE n=2 Tax=Alicycliphilus denitrificans RepID=E8TYE9_ALIDB
GrpE protein; K03687 molecular chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_1775_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1894..3837
DNA (1944bp) protein (648aa)
Chaperone protein DnaK n=2 Tax=Alicycliphilus denitrificans RepID=E8TYF0_ALIDB
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
molecular chaperone DnaK; K04043 molecular chaperone DnaK
SCNpilot_expt_300_bf_scaffold_1775_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3933..5066
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=2 Tax=Alicycliphilus denitrificans RepID=E8TYF1_ALIDB
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_1775_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5282..5959
DNA (678bp) protein (226aa)
PEP motif putative anchor domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDQ6_ALIDK
PEP motif putative anchor domain-containing protein
PEP motif putative anchor domain protein {ECO:0000313|EMBL:AEB83723.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_1775_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6034..7305)
DNA (1272bp) protein (424aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1]
Tryptophanase {ECO:0000313|EMBL:ADV00851.1}; EC=4.1.99.1 {ECO:0000313|EMBL:ADV00851.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Tryptophanase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYF3_ALIDB
Displaying 8 items

View Taxonomy