name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_424_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32..541)
|
Transcriptional regulator, AraC family with amidase-like domain n=2 Tax=Comamonadaceae RepID=A1W5C3_ACISJ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EIK92156.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
689..1282
|
Isochorismatase hydrolase n=1 Tax=Comamonas testosteroni S44 RepID=D8D270_COMTE
Isochorismatase hydrolase {ECO:0000313|EMBL:EHN65601.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
isochorismatase hydrolase
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1310..2590)
|
Integrase family protein n=2 Tax=Proteobacteria RepID=B7X4D5_COMTE
Integrase family protein {ECO:0000313|EMBL:EED70485.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
phage integrase family protein
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2773..3114)
|
Chorismate mutase; K04782 isochorismate pyruvate lyase [EC:4.2.99.21]
Chorismate mutase, type II n=2 Tax=Alicycliphilus denitrificans RepID=F4G8H4_ALIDK
Chorismate mutase, type II {ECO:0000313|EMBL:AEB86699.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3111..4610)
|
anthranilate synthase component i (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
Anthranilate synthase component I n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVB0_ALIDB
Anthranilate synthase component I {ECO:0000313|EMBL:GAO21132.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4953..6722
|
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8H6_ALIDK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEB86701.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6885..9650
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8H7_ALIDK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEB86702.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9589..10341)
|
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Phosphoglycolate phosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8H8_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10529..10903
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8H9_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86704.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10922..11602)
|
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Ribulose-phosphate 3-epimerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVB5_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11651..12058
|
Protein ApaG n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8I1_ALIDK
protein ApaG; K06195 ApaG protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12055..14043
|
Site-specific recombinase Gcr n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8I2_ALIDK
site-specific recombinase Gcr
Site-specific recombinase Gcr {ECO:0000313|EMBL:AEB86707.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14213..15478
|
Sodium/hydrogen exchanger n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8I3_ALIDK
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEB86708.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15531..16535
|
carboxylate-amine ligase ybdK; K06048 carboxylate-amine ligase [EC:6.3.-.-]
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Carboxylate-amine ligase Alide2_4404 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8I4_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16538..17524
|
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Thiamine-monophosphate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8I5_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_16
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17531..18421)
|
LysR-family transcriptional regulator n=3 Tax=Bordetella bronchiseptica RepID=K4QL73_BORBO
LysR family transcriptional regulator
rbh
LysR substrate-binding domain protein {ECO:0000313|EMBL:ETH91272.1}; TaxID=1331279 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis STO1-CHOC-0019.;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_17
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18535..19512
|
Putative exported protein n=2 Tax=Bordetella RepID=J7RG99_BORP1
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CCJ63502.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 /; 18323).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_18
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19533..19877
|
Uncharacterized protein n=3 Tax=Bordetella pertussis RepID=F4LEF2_BORPC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ63503.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 /; 18323).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_19
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19874..21046
|
Uncharacterized protein n=2 Tax=Bordetella RepID=K0MKQ6_BORPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ50443.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_20
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21051..21470
|
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MVX5_BORBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE41234.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_21
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21475..22458
|
Putative exported protein n=3 Tax=Bordetella bronchiseptica RepID=K0N0J6_BORBM
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KCV65244.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_22
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22455..24104
|
Putative CoA ligase n=4 Tax=Bordetella RepID=K0MYZ8_BORBM
AMP-binding enzyme {ECO:0000313|EMBL:KCV65248.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
putative CoA ligase
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24146..24835)
|
Regulatory protein TetR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8J3_ALIDK
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEB86718.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24994..26736
|
poly-beta-hydroxybutyrate polymerase domain protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly-beta-hydroxybutyrate polymerase domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC2_ALIDB
Poly-beta-hydroxybutyrate polymerase domain protein {ECO:0000313|EMBL:ADV01767.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26756..28222
|
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC3_ALIDB
rnd efflux system, outer membrane lipoprotein, nodt family
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADV01768.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28219..29292
|
Secretion protein HlyD family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC4_ALIDB
secretion protein hlyd family protein; K01993 HlyD family secretion protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ADV01769.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29296..32043
|
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC5_ALIDB
ABC transporter; K13926 ribosome-dependent ATPase
ABC transporter related protein {ECO:0000313|EMBL:ADV01770.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32043..33176
|
ABC-2 type transporter n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC6_ALIDB
ABC transporter; K09686 antibiotic transport system permease protein
ABC-2 type transporter {ECO:0000313|EMBL:ADV01771.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33195..34634
|
Phosphate acetyltransferase {ECO:0000313|EMBL:ADV01772.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ADV01772.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phosphate acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC7_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_424_curated_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34631..35821
|
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC8_ALIDB
|