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SCNpilot_expt_300_bf_scaffold_543_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_543_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(278..1366)
DNA (1089bp) protein (363aa)
Secreted hydrolase-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRL0_ALIDB
secreted hydrolase-like protein
Secreted hydrolase-like protein {ECO:0000313|EMBL:ADU99111.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_543_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1363..2442)
DNA (1080bp) protein (360aa)
Cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000313|EMBL:AEB85906.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AEB85906.1};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cysteine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCH4_ALIDK
SCNpilot_expt_300_bf_scaffold_543_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2452..5043)
DNA (2592bp) protein (864aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCH3_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:AEB85905.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_expt_300_bf_scaffold_543_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5225..5653
DNA (429bp) protein (143aa)
Heat shock protein Hsp20 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCH2_ALIDK
heat shock protein Hsp20; K13993 HSP20 family protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEB85904.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_543_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5661..6323)
DNA (663bp) protein (221aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02003 putative ABC transport system ATP-binding protein
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEB85903.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEB85903.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Phosphonate-transporting ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCH1_ALIDK
SCNpilot_expt_300_bf_scaffold_543_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6329..7291)
DNA (963bp) protein (321aa)
tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (st
tRNA dimethylallyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCH0_ALIDK
SCNpilot_expt_300_bf_scaffold_543_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7281..8531)
DNA (1251bp) protein (417aa)
major facilitator transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F31CA
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:GAD20829.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_expt_300_bf_scaffold_543_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8719..9663
DNA (945bp) protein (315aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRL7_ALIDB
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADU99118.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_543_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9660..10097)
DNA (438bp) protein (146aa)
Histidine triad (HIT) protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRL8_ALIDB
histidine triad (hit) protein; K02503 Hit-like protein involved in cell-cycle regulation
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADU99119.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_543_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10201..11223)
DNA (1023bp) protein (341aa)
Porin Gram-negative type n=2 Tax=Alicycliphilus denitrificans RepID=F4GCG6_ALIDK
porin
Porin Gram-negative type {ECO:0000313|EMBL:AEB85898.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_543_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11471..12094
DNA (624bp) protein (208aa)
Cyclic nucleotide-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM0_ALIDB
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ADU99121.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_543_curated_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12380..14479
DNA (2100bp) protein (700aa)
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRM1_ALIDB
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:GAO27257.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_543_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14616..16205
DNA (1590bp) protein (530aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEB85894.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEB85894.1};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM2_ALIDB
SCNpilot_expt_300_bf_scaffold_543_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16192..17265
DNA (1074bp) protein (358aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM3_ALIDB
inner-membrane translocator; K02057 simple sugar transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADU99124.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_543_curated_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18408..19124
DNA (717bp) protein (239aa)
membrane protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036E9DB6
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
Displaying 15 items

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