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SCNpilot_expt_300_bf_scaffold_1089_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1089_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(177..638)
DNA (462bp) protein (154aa)
phosphoglycerate mutase; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Phosphoglycerate mutase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQZ0_ALIDB
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:GAO23060.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_1089_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(638..1855)
DNA (1218bp) protein (406aa)
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Polyphosphate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQZ1_ALIDB
SCNpilot_expt_300_bf_scaffold_1089_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1804..2769)
DNA (966bp) protein (322aa)
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Polyphosphate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQZ1_ALIDB
SCNpilot_expt_300_bf_scaffold_1089_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2848..3666)
DNA (819bp) protein (273aa)
Ornithine-acyl(Acyl carrier protein) N-acyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQZ2_ALIDB
ornithine-acyl(acyl carrier protein) n-acyltransferase
Ornithine-acyl(Acyl carrier protein) N-acyltransferase {ECO:0000313|EMBL:ADV00228.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_1089_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3865..5658
DNA (1794bp) protein (598aa)
Diguanylate cyclase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQZ3_ALIDB
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEB85029.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_1089_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5750..7084)
DNA (1335bp) protein (445aa)
phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phosphoglucosamine mutase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQZ4_ALIDB
SCNpilot_expt_300_bf_scaffold_1089_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7074..7970)
DNA (897bp) protein (299aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Dihydropteroate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQZ5_ALIDB
SCNpilot_expt_300_bf_scaffold_1089_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8039..9091)
DNA (1053bp) protein (351aa)
ATP-dependent metalloprotease ftsh (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Alicycliphilus denitrificans RepID=E8TQZ6_ALIDB
SCNpilot_expt_300_bf_scaffold_1089_curated_9
unknown

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9891..10127
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 9 items

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