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SCNpilot_expt_300_bf_scaffold_227_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_227_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1144
DNA (1143bp) protein (381aa)
Basic membrane lipoprotein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM5_ALIDB
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein
Basic membrane lipoprotein {ECO:0000313|EMBL:GAO27261.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1185..2339
DNA (1155bp) protein (385aa)
Basic membrane lipoprotein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM6_ALIDB
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein
Basic membrane lipoprotein {ECO:0000313|EMBL:AEB85890.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_227_curated_3
unknown

Not on your lists

comp(2486..3178)
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_227_curated_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4022..5569
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C0A0D
AMP-binding protein {ECO:0000313|EMBL:KJB90369.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Acyl-CoA synthetase/AMP-acid ligase II
SCNpilot_expt_300_bf_scaffold_227_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5643..6371
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X101_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43840.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
sorbitol-6-phosphate 2-dehydrogenase-like
SCNpilot_expt_300_bf_scaffold_227_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6419..7036
DNA (618bp) protein (206aa)
DSBA oxidoreductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU0_DELAS
DSBA oxidoreductase {ECO:0000313|EMBL:EZP48373.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
DSBA oxidoreductase
SCNpilot_expt_300_bf_scaffold_227_curated_7
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7052..8020
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U850_ADVKW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK61188.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
SCNpilot_expt_300_bf_scaffold_227_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8028..8999
DNA (972bp) protein (324aa)
2-nitropropane dioxygenase NPD; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase-like enzyme n=1 Tax=Acidovorax sp. CF316 RepID=J0KNW9_9BURK
Nitronate monooxygenase {ECO:0000313|EMBL:KGH13019.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_expt_300_bf_scaffold_227_curated_9
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9023..10219
DNA (1197bp) protein (399aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9A7_9BURK
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EDT07266.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_expt_300_bf_scaffold_227_curated_10
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10230..11372
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase domain-containing protein id=12550941 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_expt_300_bf_scaffold_227_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11550..12602
DNA (1053bp) protein (351aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Adenosine deaminase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSB1_ALIDB
SCNpilot_expt_300_bf_scaffold_227_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12704..13351)
DNA (648bp) protein (216aa)
arylformamidase (EC:3.5.1.9); K07130 arylformamidase [EC:3.5.1.9]
Kynurenine formamidase {ECO:0000256|HAMAP-Rule:MF_01969, ECO:0000256|SAAS:SAAS00035513}; Short=KFA {ECO:0000256|HAMAP-Rule:MF_01969};; Short=KFase {ECO:0000256|HAMAP-Rule:MF_01969};; EC=3.5.1.9 {ECO:0000256|HAMAP-Rule:MF_01969, ECO:0000256|SAAS:SAAS00035517};; Arylformamidase {ECO:0000256|HAMAP-Rule:MF_01969}; N-formylkynurenine formamidase {ECO:0000256|HAMAP-Rule:MF_01969}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
Kynurenine formamidase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSB9_ALIDB
SCNpilot_expt_300_bf_scaffold_227_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13353..13676)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSC0_ALIDB
hypothetical protein; K06940
Uncharacterized protein {ECO:0000313|EMBL:ADU99143.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_227_curated_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13797..14096
DNA (300bp) protein (100aa)
FeoA family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC1_ALIDB
FeoA family protein; K04758 ferrous iron transport protein A
FeoA family protein {ECO:0000313|EMBL:GAO27280.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14093..16021
DNA (1929bp) protein (643aa)
Ferrous iron transport protein B n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCE0_ALIDK
Ferrous iron transport protein B {ECO:0000313|EMBL:AEB85872.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
ferrous iron transport protein B; K04759 ferrous iron transport protein B
SCNpilot_expt_300_bf_scaffold_227_curated_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16023..16268
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO27282.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16328..16675)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC4_ALIDB
hypothetical protein; K06940
Uncharacterized protein {ECO:0000313|EMBL:AEB85870.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_227_curated_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16774..16983
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO27284.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16990..17523
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBM3_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85868.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_227_curated_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17692..18612)
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Ornithine carbamoyltransferase, catabolic n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC7_ALIDB
SCNpilot_expt_300_bf_scaffold_227_curated_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18629..19825)
DNA (1197bp) protein (399aa)
acetylornithine and succinylornithine aminotransferase; K00818 acetylornithine aminotransferase [EC:2.6.1.11]
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acetylornithine aminotransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC8_ALIDB
SCNpilot_expt_300_bf_scaffold_227_curated_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20063..20377
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSC9_ALIDB
hypothetical protein
Histone acetyltransferase {ECO:0000313|EMBL:GAO27288.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20499..20798)
DNA (300bp) protein (100aa)
30S ribosomal protein S20 n=4 Tax=Comamonadaceae RepID=RS20_ACIET
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20903..22468
DNA (1566bp) protein (522aa)
Integral membrane protein MviN n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD3_ALIDB
integral membrane protein MviN; K03980 virulence factor
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_227_curated_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22485..23333
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD4_ALIDB
hypothetical protein
Transglutaminase domain-containing protein {ECO:0000313|EMBL:GAO27293.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_227_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23335..23730)
DNA (396bp) protein (132aa)
UspA domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD5_ALIDB
uspa domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEB85847.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_227_curated_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23955..25040)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85846.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_227_curated_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25065..26111)
DNA (1047bp) protein (349aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA54_ACISJ
SCNpilot_expt_300_bf_scaffold_227_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26260..28212)
DNA (1953bp) protein (651aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ADU99161.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ADU99161.1};; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD8_ALIDB
SCNpilot_expt_300_bf_scaffold_227_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28536..29243
DNA (708bp) protein (236aa)
DnaA regulatory inactivator Hda n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD9_ALIDB
DnaA regulatory inactivator Hda; K10763 DnaA-homolog protein
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:AEB85843.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 66 in total

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