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SCNpilot_expt_300_bf_scaffold_228_curated

Search features with annotation key words

Displaying items 151-177 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_228_curated_151
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163809..164906)
DNA (1098bp) protein (366aa)
AFG1-family ATPase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC5_ALIDB
afg1-family atpase; K06916
AFG1-family ATPase {ECO:0000313|EMBL:ADV00399.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_228_curated_152
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164984..166411)
DNA (1428bp) protein (476aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Dihydrolipoamide dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC6_ALIDB
SCNpilot_expt_300_bf_scaffold_228_curated_153
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166497..167759)
DNA (1263bp) protein (421aa)
2-oxoglutarate dehydrogenase E2; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC7_ALIDB
SCNpilot_expt_300_bf_scaffold_228_curated_154
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167812..170688)
DNA (2877bp) protein (959aa)
2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase, E1 subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC8_ALIDB
Oxoglutarate dehydrogenase protein {ECO:0000313|EMBL:GAO22864.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_155
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170888..171946
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTC9_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85374.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_228_curated_156
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172014..172997)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00404.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_228_curated_157
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173048..173410)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTD1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85376.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_228_curated_158
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173425..174777)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTD2_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00406.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_228_curated_159
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174870..175775
DNA (906bp) protein (302aa)
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTD3_ALIDB
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO22860.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_160
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175913..176779
DNA (867bp) protein (289aa)
UspA domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6I8_ALIDK
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:GAO22859.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_161
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176817..178454)
DNA (1638bp) protein (546aa)
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD5_ALIDB
ABC transporter; K13896 microcin C transport system ATP-binding protein
ABC transporter {ECO:0000313|EMBL:GAO22858.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_162
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178456..179496)
DNA (1041bp) protein (347aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6J0_ALIDK
ABC transporter permease; K13895 microcin C transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB85381.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_228_curated_163
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179480..180517)
DNA (1038bp) protein (346aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD7_ALIDB
binding-protein-dependent transport systems inner membrane component; K13894 microcin C transport system permease protein
Transmembrane protein {ECO:0000313|EMBL:GAO22856.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_164
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180535..180765)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTD8_ALIDB
Isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:GAO22855.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_165
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180992..182815)
DNA (1824bp) protein (608aa)
Extracellular solute-binding protein family 5 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTD9_ALIDB
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADV00413.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
ABC transporter substrate-binding protein; K13893 microcin C transport system substrate-binding protein
SCNpilot_expt_300_bf_scaffold_228_curated_166
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182863..183663
DNA (801bp) protein (267aa)
enoyl-ACP reductase (NADH) (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6J4_ALIDK
SCNpilot_expt_300_bf_scaffold_228_curated_167
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183759..184637
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6J5_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85386.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_228_curated_168
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184769..184993)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTE2_ALIDB
hypothetical protein; K09794 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85387.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_228_curated_169
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

185142..186056
DNA (915bp) protein (305aa)
DNA ligase (ATP) (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase (ATP) {ECO:0000313|EMBL:AEB85388.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AEB85388.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
DNA ligase (ATP) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6J7_ALIDK
SCNpilot_expt_300_bf_scaffold_228_curated_170
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186244..186993
DNA (750bp) protein (250aa)
Integral membrane protein TerC n=2 Tax=Alicycliphilus denitrificans RepID=E8TTE4_ALIDB
integral membrane protein TerC
YjbE family integral membrane protein {ECO:0000313|EMBL:GAO22849.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_171
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187054..189414)
DNA (2361bp) protein (787aa)
Lysine decarboxylase {ECO:0000313|EMBL:AEB85390.1}; EC=4.1.1.18 {ECO:0000313|EMBL:AEB85390.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Lysine decarboxylase (EC:4.1.1.18); K01584 arginine decarboxylase [EC:4.1.1.19]
Lysine decarboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6J9_ALIDK
SCNpilot_expt_300_bf_scaffold_228_curated_172
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189563..189994
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTE6_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO21867.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_228_curated_173
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190064..190981
DNA (918bp) protein (306aa)
Band 7 protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTE7_ALIDB
band 7 protein
Band 7 protein {ECO:0000313|EMBL:ADV00421.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_228_curated_174
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190978..191880)
DNA (903bp) protein (301aa)
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTE8_ALIDB
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO21869.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
LysR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_228_curated_175
unknown

Not on your lists

192051..192854
DNA (804bp) protein (268aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_228_curated_176
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192800..193759
DNA (960bp) protein (320aa)
acetolactate synthase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6K3_ALIDK
Thiamine pyrophosphate protein {ECO:0000313|EMBL:GAO21870.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_228_curated_177
unknown

Not on your lists

194339..194584
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003638882
Displaying items 151-177 of 177 in total

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