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SCNpilot_expt_300_bf_scaffold_761_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_761_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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400..1629
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW1_ALIDB
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEB83946.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_761_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1645..1917)
DNA (273bp) protein (91aa)
Histone family protein nucleoid-structuring protein H-NS n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW2_ALIDB
histone family protein nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
Histone family protein nucleoid-structuring protein H-NS {ECO:0000313|EMBL:GAO21963.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_761_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1999..2796
DNA (798bp) protein (266aa)
Regulatory protein IclR n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW3_ALIDB
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:GAO24123.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_761_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3052..3825
DNA (774bp) protein (258aa)
short-chain dehydrogenase/reductase sdr; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW4_ALIDB
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:GAO21961.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_761_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3853..5079
DNA (1227bp) protein (409aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB83942.1}; EC=1.3.99.10 {ECO:0000313|EMBL:AEB83942.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW5_ALIDB
SCNpilot_expt_300_bf_scaffold_761_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5089..6789
DNA (1701bp) protein (567aa)
AMP-dependent synthetase/ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVW6_ALIDB
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADV00630.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_761_curated_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6910..8076)
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW7_ALIDB
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
ABC transporter periplasmic protein {ECO:0000313|EMBL:GAO24127.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_761_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8120..8827)
DNA (708bp) protein (236aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW8_ALIDB
ABC transporter ATPase {ECO:0000313|EMBL:GAO21957.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_761_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8814..9578)
DNA (765bp) protein (255aa)
sulfate-transporting ATPase (EC:3.6.3.25); K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVW9_ALIDB
ABC transporter related protein {ECO:0000313|EMBL:ADV00633.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_761_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9565..10539)
DNA (975bp) protein (325aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TVX0_ALIDB
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADV00634.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_761_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10540..11403)
DNA (864bp) protein (288aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TVX1_ALIDB
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADV00635.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_761_curated_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11902..11982)
DNA (81bp) protein (27aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7A5_ACISJ
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:GAO24148.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying 12 items

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