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SCNpilot_expt_300_bf_scaffold_1383_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1383_curated_1
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(153..1202)
DNA (1050bp) protein (350aa)
Fic family protein n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AVV1_BURRH
AsnC family transcriptional regulator {ECO:0000313|EMBL:KFL52276.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
Fic family protein
SCNpilot_expt_300_bf_scaffold_1383_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2058..2798)
DNA (741bp) protein (247aa)
Integrase catalytic region n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T968_ACIDE
Integrase catalytic region {ECO:0000313|EMBL:EER58982.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
integrase catalytic subunit; K07497 putative transposase
SCNpilot_expt_300_bf_scaffold_1383_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2915..3181)
DNA (267bp) protein (89aa)
Transposase IS3/IS911 family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKG0_VARPS
transposase IS3/IS911 family protein; K07497 putative transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACS17258.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_expt_300_bf_scaffold_1383_curated_4
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3318..4610)
DNA (1293bp) protein (431aa)
hypothetical protein id=12555693 bin=CNBR_ACIDO species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=GWA2_Gallionellales_54_124_curated
SCNpilot_expt_300_bf_scaffold_1383_curated_5
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4688..5539)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003649930
Uncharacterized protein {ECO:0000313|EMBL:ETC87744.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1383_curated_6
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5536..6141)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000372A930
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Displaying 6 items

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