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SCNpilot_expt_300_bf_scaffold_1294_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1294_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..655)
DNA (654bp) protein (218aa)
Polysaccharide deacetylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G690_ALIDK
Polysaccharide deacetylase {ECO:0000313|EMBL:GAO20279.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
polysaccharide deacetylase
SCNpilot_expt_300_bf_scaffold_1294_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(652..1980)
DNA (1329bp) protein (443aa)
Wzy family polymerase, exosortase system type 1 associated n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G689_ALIDK
Wzy family polymerase {ECO:0000313|EMBL:GAO20280.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
wzy family polymerase
SCNpilot_expt_300_bf_scaffold_1294_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2014..2145)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G688_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83119.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_1294_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2171..3790)
DNA (1620bp) protein (540aa)
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G687_ALIDK
4-amino-4-deoxy-L-arabinose transferase-like protein {ECO:0000313|EMBL:GAO20281.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
4-amino-4-deoxy-L-arabinose transferase-like protein
SCNpilot_expt_300_bf_scaffold_1294_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3777..4979)
DNA (1203bp) protein (401aa)
Glycosyl transferase group 1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G686_ALIDK
Group 1 glycosyl transferase {ECO:0000313|EMBL:GAO20282.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
group 1 glycosyl transferase
SCNpilot_expt_300_bf_scaffold_1294_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5002..6222)
DNA (1221bp) protein (407aa)
nucleotide sugar dehydrogenase; K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-]
Nucleotide sugar dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYY9_ALIDB
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADU98514.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_1294_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6212..6844)
DNA (633bp) protein (211aa)
udp-n-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADU98513.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ADU98513.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYY8_ALIDB
SCNpilot_expt_300_bf_scaffold_1294_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7298..8425)
DNA (1128bp) protein (376aa)
Glycosyl transferase group 1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYY7_ALIDB
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADU98512.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_1294_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8529..9671)
DNA (1143bp) protein (381aa)
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYY6_ALIDB
sugar transferase, pep-cterm/epsh1 system associated
Sugar transferase, PEP-CTERM/EpsH1 system associated {ECO:0000313|EMBL:ADU98511.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_1294_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9664..11511)
DNA (1848bp) protein (616aa)
Exosortase 1 system-associated amidotransferase 1 {ECO:0000313|EMBL:ADU98510.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ADU98510.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
exosortase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYY5_ALIDB
SCNpilot_expt_300_bf_scaffold_1294_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11514..12800)
DNA (1287bp) protein (429aa)
Exosortase 1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYY4_ALIDB
exosortase
Exosortase 1 {ECO:0000313|EMBL:ADU98509.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying 11 items

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