name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_349_curated_1
unknown
|
Not on your lists |
comp(3..104)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_349_curated_2
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(231..1448)
|
patB; Cystathionine beta-lyase PatB (EC:4.4.1.8)
aspartate aminotransferase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003706940
Aspartate aminotransferase {ECO:0000313|EMBL:KHK50946.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
|
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SCNpilot_expt_300_bf_scaffold_349_curated_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1448..2452)
|
hypothetical protein id=5080188 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2501..3700)
|
hippuricase; K01451 hippurate hydrolase [EC:3.5.1.32]
amidohydrolase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395AA7D
Amidohydrolase {ECO:0000313|EMBL:KEH12132.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_5
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3832..4740
|
Putative LysR family transcriptional regulator n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2H5_ESCHE
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAB52183.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_6
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4760..5785)
|
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
alcohol dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C3085
Alcohol dehydrogenase {ECO:0000313|EMBL:AJC22197.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5782..6867)
|
Amine oxidase; protein n=2 Tax=Ralstonia solanacearum RepID=B5SBJ4_RALSL
Amine oxidase protein {ECO:0000313|EMBL:CEJ16829.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
amine oxidase
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_8
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6861..7523)
|
Anti-ECFsigma factor ChrR n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSL6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AJC22195.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
anti-ECF sigma factor ChrR
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7551..7835)
|
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5S3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41598.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_10
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7996..8934
|
XRE family transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036A8FE6
LysR family transcriptional regulator {ECO:0000313|EMBL:AJC22193.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8994..10430)
|
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U270_ALIDB
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADU98874.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10516..12954)
|
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U269_ALIDB
DNA internalization-related competence protein comec/rec2; K02238 competence protein ComEC
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:ADU98873.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13095..13553
|
Endoribonuclease L-PSP n=2 Tax=Alicycliphilus denitrificans RepID=E8U268_ALIDB
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADU98872.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13697..16039)
|
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
DNA topoisomerase 4 subunit A n=2 Tax=Alicycliphilus denitrificans RepID=E8U267_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16096..18072)
|
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
DNA topoisomerase 4 subunit B n=2 Tax=Alicycliphilus denitrificans RepID=E8U266_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18195..19385
|
Major facilitator superfamily MFS_1 n=2 Tax=Alicycliphilus denitrificans RepID=E8U265_ALIDB
major facilitator superfamily mfs_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEB86107.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19388..19516
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U264_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO26970.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19516..20049
|
Methyltransferase type 11 n=2 Tax=Alicycliphilus denitrificans RepID=E8U263_ALIDB
methyltransferase type 11
Type 11 methyltransferase {ECO:0000313|EMBL:GAO26969.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20058..20954
|
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U262_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20990..22078
|
NlpB/DapX family lipoprotein n=2 Tax=Alicycliphilus denitrificans RepID=E8U261_ALIDB
nlpb/dapx family lipoprotein; K07287 lipoprotein-34
NlpBDapX family lipoprotein {ECO:0000313|EMBL:AEB86111.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22663..23175)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U260_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO26965.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23177..24301)
|
Transcription factor jumonji jmjC domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U259_ALIDB
hypothetical protein
Transcription factor jumonji jmjC domain-containing protein {ECO:0000313|EMBL:ADU98863.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24355..24879
|
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8U258_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24895..25341)
|
deoxyuridine 5'-triphosphate nucleotidohydrolase dut (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23]
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U257_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25410..25805)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U256_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO26961.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25802..27058)
|
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:ADU98859.1}; EC=6.3.2.5 {ECO:0000313|EMBL:ADU98859.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U255_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27103..28752
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
CTP synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U254_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28758..29615
|
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
2-dehydro-3-deoxyphosphooctonate aldolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U253_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29618..29908
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U252_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98856.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_349_curated_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30091..31377
|
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Enolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U251_ALIDB
|