ggKbase home page

SCNpilot_expt_300_bf_scaffold_510_curated_20

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 20254..20763

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI00030E0CA3 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 169.0
  • Bit_score: 303
  • Evalue 1.60e-79
DNA repair protein RadC {ECO:0000313|EMBL:KGA42483.1}; TaxID=78398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. odoriferum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 169.0
  • Bit_score: 303
  • Evalue 1.70e-79
DNA repair protein Radc; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 169.0
  • Bit_score: 299
  • Evalue 9.20e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pectobacterium carotovorum → Pectobacterium → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGTCGCAACTGTCCTTTTCCTCGTTCGATGCCTCGTTGATGGTGCGTGACGCACAGGGGCGCTACCTGCTGGCGACAACTGACCAGATTCTGGAGGCCGCGCGCCAGGCCATCGAGCACAAGATGCGGCGCGGTGCATCGTTCAGTTCGCCGGTGGCGGTCAAGGAGTACCTGAGCGCCAAGTTGGCTGGTTTTGAGCATGAAGTCTTCGCAGTACTGTTCTTGGATACGCAGCATCGCCTGATCGAATACTGCGAGCTTTTCCGAGGCACCATCGACAGTGCATCGGTGTATCCACGCGAGCTGGTCAAGGAGGCGCTGCGGCTCAATGCGGCAGCGGTCATCGTTTCGCACAACCATCCGAGCGGCAATCCAGAGCCGAGCAGGGCCGACGAGGAACTGACCCAGCGGCTCAAGGAGGCGCTGGCGCTGGTGGATGTGCGCACGTTGGATCACATCATCGTGGCGGGCAGCAGCATCACATCGTTTGCCGAACGCGGTCTGATTTGA
PROTEIN sequence
Length: 170
MSQLSFSSFDASLMVRDAQGRYLLATTDQILEAARQAIEHKMRRGASFSSPVAVKEYLSAKLAGFEHEVFAVLFLDTQHRLIEYCELFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSRADEELTQRLKEALALVDVRTLDHIIVAGSSITSFAERGLI*