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SCNpilot_expt_300_bf_scaffold_250_curated_23

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(23533..24402)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CNW0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 280
  • Evalue 1.80e-72
Transcriptional regulator {ECO:0000313|EMBL:EJN09564.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 280
  • Evalue 2.60e-72
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 279.0
  • Bit_score: 263
  • Evalue 9.60e-68

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGTTTACCCTAAATTCGATGAGCGCGACCTGCGTTCATTGAGGGTGTTCTGCTCGGTGGCGCATGCGCGGGGCTTCACGGCGGCGGAGCAGCGCATCCATCTTTCCAAGGCCTCCATCAGCCGCCACATCCGGGAGCTGGAGGAGAAGCTGGGCGTGCGGCTATGCGAACGCGGCCCCGGCGGGTTCGAGCTCACGCCGGCCGGCATCGCGGCCCTGGAGTCGGGCACCCGTGCGCTGGAGGCGCTCGACCGGGTCATGCCCGAGATCGATTCCGTGCATGGCGTGCTGTCGGGGCCCCTGTACATCGGGGTCACGGAGCACTTGCTGGCCTCGGGCGGCTCGGGCATCCCGGCCGCGCTGGAGATCCTGCGGTCGCGCGCGCCGGGGGTCCGCCCCGAGCTGATGGTGCTGAGCTACTGGCAGCTCAAGCGGGCCCTGCGCGAAGGCCGGGTCGAGATTGCGATCCATGGGCGTTATGGAAACGACCGGTCGCTGGAATACCTGGCGCTGTTCGACGAGGAGCACAGGCTCTATGCGCGGCCCGATTTTTCCCCCGGGCCAGGGGCGCCGGTGCGCCTGGTGATGCGCACCCACCCGTTCGTCGACGCCCTGCTCGAATCGCCCCCTTATGTGCCGGGGCCGGTCGCCAACGGCCTCGAATCGGTGGCGTTCCACGTCGCCGCCGGGGGCTGCGTCGGCCTGCTGCCGGAGCACTACGCGAGCCTGGTCAGCGCCCGCTTTCCCCTGGCGGTCTGGGACGAGGCCGTGCGCTTCAAGACGACGATCTGCGCGGTGACCATGCGTTCGCGGGCCTGCTCGAAGGCCGTCACGCTGCTGCGCGACATCCTCAAGTCGCAGTGCGAATGA
PROTEIN sequence
Length: 290
MVYPKFDERDLRSLRVFCSVAHARGFTAAEQRIHLSKASISRHIRELEEKLGVRLCERGPGGFELTPAGIAALESGTRALEALDRVMPEIDSVHGVLSGPLYIGVTEHLLASGGSGIPAALEILRSRAPGVRPELMVLSYWQLKRALREGRVEIAIHGRYGNDRSLEYLALFDEEHRLYARPDFSPGPGAPVRLVMRTHPFVDALLESPPYVPGPVANGLESVAFHVAAGGCVGLLPEHYASLVSARFPLAVWDEAVRFKTTICAVTMRSRACSKAVTLLRDILKSQCE*