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SCNpilot_expt_300_bf_scaffold_315_curated_94

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 105229..105573

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein, putative n=2 Tax=Alicycliphilus denitrificans RepID=E8TW99_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 114.0
  • Bit_score: 223
  • Evalue 1.10e-55
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 114.0
  • Bit_score: 223
  • Evalue 3.30e-56
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:AEB86815.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 114.0
  • Bit_score: 223
  • Evalue 1.50e-55

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGCAAATTCAGGTGCATACCAACGATCACATCCAGGGCGGCGAATCGCTGGTGCGCTGGGTGCAGGAAGAGGCCACGACCCGCCTGGCCCGCTTTCGCGAGCATGTGACGCGCGTGGAGGTGTTCCTGTCCGACGTGGACGGCGGCAAGTCCGGCGTGGCCGACAAGCGCTGCGTGATCGAGGCCCGCCCCGCCGGCCGCCAGCCCGTGGCCGCCCATGCCGAGGCGCCCAAGGTGGCCGATGCCTTCGCCGCCGCAGCCGACAAGCTGCTGCGCTCGCTGGGCGACGACATCGCGCGCGCCAAGGACCGCCAGGGGCGCGAGACCATCCGCACGGCAGAATAA
PROTEIN sequence
Length: 115
MQIQVHTNDHIQGGESLVRWVQEEATTRLARFREHVTRVEVFLSDVDGGKSGVADKRCVIEARPAGRQPVAAHAEAPKVADAFAAAADKLLRSLGDDIARAKDRQGRETIRTAE*