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SCNpilot_expt_300_bf_scaffold_315_curated

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_315_curated_1
unknown

Not on your lists

comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_315_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(369..803)
DNA (435bp) protein (145aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXS6_ALIDB
molybdenum cofactor biosynthesis protein c; K03637 molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_315_curated_3
unknown

Not on your lists

comp(1681..2070)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_315_curated_4
unknown

Not on your lists

2542..2667
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_315_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2921..3835
DNA (915bp) protein (305aa)
acyl-CoA transferase (EC:2.8.3.16)
Probable acyl-CoA transferase/carnitine dehydratase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HWS7_BORPD
Putative acyl-CoA transferase {ECO:0000313|EMBL:GAO25561.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4053..4514
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAG2_ACIDE
Acyl dehydratase
Uncharacterized protein {ECO:0000313|EMBL:EER58540.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_expt_300_bf_scaffold_315_curated_7
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4552..5520
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ04899.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_315_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5617..6492
DNA (876bp) protein (292aa)
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXS2_ALIDB
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO25559.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6494..6964)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAV7_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86895.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_315_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6998..7735)
DNA (738bp) protein (246aa)
Integral membrane protein TerC n=2 Tax=Alicycliphilus denitrificans RepID=E8TXS0_ALIDB
YjbE family integral membrane protein
YjbE family integral membrane protein {ECO:0000313|EMBL:GAO25557.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8143..8547
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXR9_ALIDB
hypothetical protein; K06938
Uncharacterized protein {ECO:0000313|EMBL:ADV01952.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_315_curated_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8573..8890
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXR8_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO25555.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_315_curated_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8904..9464)
DNA (561bp) protein (187aa)
YaeQ family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXR7_ALIDB
yaeq family protein
YaeQ family protein {ECO:0000313|EMBL:GAO25554.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..10913)
DNA (1380bp) protein (460aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Adenylosuccinate lyase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXR6_ALIDB
SCNpilot_expt_300_bf_scaffold_315_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11028..11642
DNA (615bp) protein (205aa)
glutathione s-transferase domain protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX45_ALIDB
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AEB86889.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_315_curated_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12032..15094)
DNA (3063bp) protein (1021aa)
Acriflavin resistance protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX44_ALIDB
Acriflavin resistance protein {ECO:0000313|EMBL:ADV01947.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
acriflavin resistance protein
SCNpilot_expt_300_bf_scaffold_315_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15107..16249)
DNA (1143bp) protein (381aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX43_ALIDB
efflux transporter, rnd family, mfp subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV01946.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_315_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16749..19496)
DNA (2748bp) protein (916aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain D
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
Glutamate-ammonia-ligase adenylyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TX42_ALIDB
SCNpilot_expt_300_bf_scaffold_315_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19590..23672
DNA (4083bp) protein (1361aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX41_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01944.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_315_curated_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23669..24484
DNA (816bp) protein (272aa)
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase; K01501 nitrilase [EC:3.5.5.1]
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX40_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO25543.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24508..26601
DNA (2094bp) protein (698aa)
multi-sensor signal transduction histidine kinase; K11711 two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
PAS sensor protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX39_ALIDB
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:GAO25542.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26601..27236
DNA (636bp) protein (212aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TX38_ALIDB
response regulator receiver; K11712 two-component system, LuxR family, response regulator DctR
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEB86882.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_315_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27290..27934)
DNA (645bp) protein (215aa)
OmpA/MotB domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX37_ALIDB
ompa/motb domain protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEB86881.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_315_curated_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28062..28184)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX36_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO25539.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28318..29334
DNA (1017bp) protein (339aa)
mlta domain protein; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-]
MltA domain protein n=2 Tax=Alicycliphilus denitrificans RepID=F4GAU2_ALIDK
MltA domain protein {ECO:0000313|EMBL:AEB86880.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_315_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29446..31155)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX34_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:AEB86879.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_315_curated_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31299..31772)
DNA (474bp) protein (158aa)
Transcription regulator AsnC-type-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX33_ALIDB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAO25536.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_315_curated_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31952..35569
DNA (3618bp) protein (1206aa)
pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX32_ALIDB
Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein {ECO:0000313|EMBL:ADV01935.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_315_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35833..36105
DNA (273bp) protein (91aa)
Preprotein translocase, YajC subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TX31_ALIDB
preprotein translocase, yajc subunit; K03210 preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AEB86876.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_315_curated_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36188..38083
DNA (1896bp) protein (632aa)
Protein translocase subunit SecD n=2 Tax=Alicycliphilus denitrificans RepID=E8TX30_ALIDB
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
protein-export membrane protein secd; K03072 preprotein translocase subunit SecD
Displaying items 1-30 of 148 in total

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