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SCNpilot_expt_300_bf_scaffold_1175_curated_3

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3208..3480)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381E1AD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 185
  • Evalue 1.90e-44
Conjugal transfer protein TrbD {ECO:0000313|EMBL:GAD24981.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 185
  • Evalue 2.70e-44
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 184
  • Evalue 1.80e-44

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAGTGCCCCGGACACCTTCGCGGCCGGGTTCGAGGTGCCGCTGCATCGCTCGCTCACCGAGCCGATCTTGCTGGGCGGCGCACCGCGCACCGTGGCGATCGCCAACGGCACGTTGGCCGCCGCTGTCGGGCTGGGCCTGCAACTGTGGATTCCCGGTGTCGTGCTTTGGATCGTCGGCCATTCGCTGGCGATGTGGGGCGCGCGCGTCGATCCGCAGTTCATGGCCGTGTTCGCGCGGCACATCAAGCACCGCCCGCTGCTCGACGTGTGA
PROTEIN sequence
Length: 91
MSAPDTFAAGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHSLAMWGARVDPQFMAVFARHIKHRPLLDV*