ggKbase home page

SCNpilot_expt_300_bf_scaffold_385_curated_68

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 75249..76640

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 methylthiotransferase rimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 463.0
  • Bit_score: 929
  • Evalue 3.80e-268
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=596154 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 463.0
  • Bit_score: 929
  • Evalue 1.70e-267
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCK3_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 463.0
  • Bit_score: 929
  • Evalue 1.20e-267

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAGCGAAGTACTCTCCCCCACGAAAACCCCGAAGATCGGCTTCGTCAGCCTGGGCTGCCCCAAGAACCTGACGGATTCCGAACTCATCCTCACGCAGCTCTCGGCCGAGGGCTACGAAACCTCCAAGACCTTCCAGGGCGCCGATCTCGTCATCGTCAACACCTGCGGCTTCATCGACGATGCCGTGCGCGAGAGCCTGGACACCATCGGCGAGGCGCTGGCCGACAACGGCAAGGTGATCGTCACCGGCTGCCTGGGCGCGCGCGCGGACGACGGCGGCGGCAACCTCGTCAAGGGCGTGCACCCCAACGTGCTCGCCGTCACCGGCCCGCATGCCGCGCAGGAGGTGATGGAGCACGTGCACCAGCATCTGCCCAAGCCGCACGACCCCTTCCTGGACCTGGTGCCCGGCACGTTCGGCGAGGCCGGCATCAAGCTCACGCCGCGCCATTACGCGTACCTGAAGATCTCGGAGGGCTGCAACCACCGCTGCACCTTCTGCATCATTCCCTCGATGCGCGGCGACCTCGTGTCGCGCCCCATCGGCGACGTGCTCAACGAGGCCAGGGCCTTGTTCGAGGGCGGCGTGAAGGAACTGCTCGTCGTGAGCCAGGACACCTCGGCCTACGGCGTGGACGTGAAGTACCGCACGGGCTTCTGGGACGGCAAGCCGGTCAGGACGCGCCTGCTGGAGCTCGTGCAGACCCTGGGCGCGATCGCCAGGCCCTACGGTGCCTGGGTGCGCCTGCACTACGTCTACCCCTATCCGAGCGTGGACGACATCATCCCGCTGATGCAGGAGGGGCTGGTGCTGCCCTACCTGGACGTGCCGTTCCAGCACAGCCACCCCGATGTTCTGAAGCGCATGAAGCGCCCGGCCAGCGGAGAGAGGAACCTGGAGCGCATCCAGCGCTGGCGCGAGATGTGCCCCGAGCTGGTGGTCCGCAGCACCTTCATCGCGGGCTTTCCGGGCGAGACGGCGGAAGAGTTCGGGCACCTGCTGCAGTTCCTGCGCGAGGCGCAGATCGACCGTGCCGGCTGCTTCGCCTACAGCAACGTGCAGGGCGCCGCCGCCAACGACCTGCCGGGCATGCTGCCCATGGAGCTGCGCGAGGAGCGCCGCGCGCGCTTCATGGCCGTGGCCGAGGAAGTCTCCACCGCCCGGCTGCAGCGGCGCGTGGGCCAGACCCTGCAGGTGCTGGTGGACAAGGCCGTGGGCCTGGGCAAGAAAGGCGGCGTGGGCCGCAGCTGGGCCGACGCGCCCGAGATCGACGGCCTGGTCCACCTGCTGCCGCCCGAGAAGATCAGCAAGACCTACAAGGTGGGCGACTTCGTCAAGGCGCGCATCGTGGGCACGCAGGGGCACGACCTGGTGGGCGTGCCGGTCTGA
PROTEIN sequence
Length: 464
MSEVLSPTKTPKIGFVSLGCPKNLTDSELILTQLSAEGYETSKTFQGADLVIVNTCGFIDDAVRESLDTIGEALADNGKVIVTGCLGARADDGGGNLVKGVHPNVLAVTGPHAAQEVMEHVHQHLPKPHDPFLDLVPGTFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLNEARALFEGGVKELLVVSQDTSAYGVDVKYRTGFWDGKPVRTRLLELVQTLGAIARPYGAWVRLHYVYPYPSVDDIIPLMQEGLVLPYLDVPFQHSHPDVLKRMKRPASGERNLERIQRWREMCPELVVRSTFIAGFPGETAEEFGHLLQFLREAQIDRAGCFAYSNVQGAAANDLPGMLPMELREERRARFMAVAEEVSTARLQRRVGQTLQVLVDKAVGLGKKGGVGRSWADAPEIDGLVHLLPPEKISKTYKVGDFVKARIVGTQGHDLVGVPV*