name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_385_curated_61
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
68499..69260
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRH4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99075.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_62
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(69315..70097)
|
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AEB85941.1}; EC=1.1.1.30 {ECO:0000313|EMBL:AEB85941.1};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
3-hydroxybutyrate dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRH5_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_63
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
70245..71108
|
Alpha/beta hydrolase fold protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRH6_ALIDB
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADU99077.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_64
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
71105..73351
|
RelA/SpoT family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRH7_ALIDB
Rela/spot family protein {ECO:0000313|EMBL:GAO27214.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_65
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
73890..74105
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRH8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO27215.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_66
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
74171..74479
|
RNP-1 like RNA-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRH9_ALIDB
rnp-1 like RNA-binding protein
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:AEB85937.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_67
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
74672..75211
|
Polyhydroxyalkanoate synthesis repressor PhaR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI0_ALIDB
polyhydroxyalkanoate synthesis repressor phar
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:ADU99081.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_68
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
75249..76640
|
30S ribosomal protein S12 methylthiotransferase rimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=596154 species="Bacteria; Pro
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCK3_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_69
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(76692..77051)
|
peptidylprolyl isomerase (EC:5.2.1.8); K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRI2_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_70
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(77167..77472)
|
Putative transcriptional regulator n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI3_ALIDB
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADU99084.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_71
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(77624..78553)
|
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI4_ALIDB
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO27221.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_72
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
78662..79591
|
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Pyruvate carboxyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRI5_ALIDB
Pyruvate carboxyltransferase {ECO:0000313|EMBL:GAO27222.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_73
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
79622..80815
|
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRI6_ALIDB
l-carnitine dehydratase/bile acid-inducible protein f
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADU99087.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_74
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
80853..81836
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO27224.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_75
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
82033..82671
|
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C7E60
Uncharacterized protein {ECO:0000313|EMBL:GAD21025.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
PepSY-associated TM helix domain-containing protein; K09939 hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_76
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
82690..83214
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035FB081
Predicted periplasmic protein {ECO:0000313|EMBL:GAD21026.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_77
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
83265..84068
|
ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D72B7
ABC-type Co2+ transport system, periplasmic component {ECO:0000313|EMBL:GAD21027.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
nickel transport complex transmembrane protein NikM
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_78
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
84185..85168
|
ApbE family lipoprotein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BMY8_DELAS
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ABX37683.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_79
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
85168..86568
|
flavodoxin/nitric oxide synthase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
oxidoreductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003821857
Sulfite reductase, alpha subunit {ECO:0000313|EMBL:GAD21029.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_80
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
86802..88991
|
TonB-dependent receptor n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WSC9_COMTE
TonB-denpendent receptor {ECO:0000313|EMBL:EXU79999.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_81
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(89081..90037)
|
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-dehydropantoate 2-reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI8_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_82
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(90071..90754)
|
Methyladenine glycosylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI9_ALIDB
methyladenine glycosylase
Methyladenine glycosylase {ECO:0000313|EMBL:GAO27226.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_83
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(90838..93246)
|
RNA polymerase sigma factor RpoD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRJ1_ALIDB
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
RNA polymerase sigma factor rpod; K03086 RNA polymerase primary sigma factor
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_84
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(93505..95430)
|
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
DNA primase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRJ2_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_85
unknown
|
Not on your lists |
comp(95666..95839)
|
id=12552313 bin=BDI tax=BDI organism_group=Betaproteobacteria
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_86
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
96053..97093
|
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEB85924.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEB85924.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
O-succinylbenzoate--CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCJ2_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_87
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(97149..98711)
|
Phospholipase D/Transphosphatidylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCJ1_ALIDK
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:AEB85923.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_88
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(98708..99847)
|
Regulatory protein LysR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRJ5_ALIDB
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO27231.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_89
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
99898..100632
|
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicycliphilus denitrificans RepID=E8TRJ6_ALIDB
ABC transporter permease; K05773 tungstate transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB85921.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_385_curated_90
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
100629..101405
|
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRJ7_ALIDB
ABC transporter; K06857 tungstate transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADU99098.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|