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SCNpilot_expt_300_bf_scaffold_385_curated_71

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(77624..78553)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI4_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 309.0
  • Bit_score: 586
  • Evalue 1.30e-164
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 309.0
  • Bit_score: 586
  • Evalue 4.00e-165
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO27221.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 309.0
  • Bit_score: 586
  • Evalue 1.80e-164

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCGCCTGCCCGACCTGCAATCGCTCAAGCTCTTCGTCGCCGTGTGCGAGCACCGCAGCATCGCCCGCGCGGCGGAGCGGGAGGCCATCGTCGGCTCGGCCGTGAGCAAGCGCCTCGCGCAGCTGGAGGACACGGTGGGCACGCCCCTGCTGGTGCGCCGGCGCCACGGCGTGGCGCCCACGCCGGCGGGCGAGACGCTGCTGGAGCACGCGCGCGAGATGCTGGCGAGCGTGGGCCGCATCGAGCGCGACATGGCCGCCTTCGGCACGGGCATACGCGGGCACGTGCGCATGCTGGTCACGGCATCGGTCATGGCCGAGTCGCTGGCCGACGACGTGGCCGCCTTCCTGCAGGACCCGGCGCACCGCGACATCCAGGTGAGCATGGAGGAGCGCGTGAGCCCCGAGGTGGTGCGCGGCGTGCGCGAGGGCAGCGCGTCGCTGGGCATCTGCTGGGACGCGGCCGACCTCTCGGGCCTGCACACGCGCAGCTACCGCCACGACCACCTGGCCATCGTGGCCCACCCCGCGCACCCGGTGGCGCGCGCGGCGAGCGTGCGCTTCGCCGACGTGCTGGAGCACCAGTTCGTGAGCATGCCGGCGCTCAGCGCCGTGCAGCGGCTGCTGGTGCGCGCCGCGGCCGTGGAGGGCAGGACGCTGGAGCACCGCGTGCAGGTGTCCAACTTCGACGCCGCGCTGCGCGTGGTGCGCGCCAACCTGGCCATCAGCGTGATCCCGCAGGAGGTGGCGCAGCCGTTCGCCGCCAGCACCGGCGTGCGCGTGATTGCGCTGGCCGACGACTGGGCGCGGCGGCGCTTCGCCATCTGCCACCGCGGCGAGGCGGGCCTGTCGCCCGCGGCCCGGCTGCTGGTGCAGCATCTGGCCGATCGCGCGCGGCAACATGCAAAAATGGAGCCGGCAACTTTCTGA
PROTEIN sequence
Length: 310
MRLPDLQSLKLFVAVCEHRSIARAAEREAIVGSAVSKRLAQLEDTVGTPLLVRRRHGVAPTPAGETLLEHAREMLASVGRIERDMAAFGTGIRGHVRMLVTASVMAESLADDVAAFLQDPAHRDIQVSMEERVSPEVVRGVREGSASLGICWDAADLSGLHTRSYRHDHLAIVAHPAHPVARAASVRFADVLEHQFVSMPALSAVQRLLVRAAAVEGRTLEHRVQVSNFDAALRVVRANLAISVIPQEVAQPFAASTGVRVIALADDWARRRFAICHRGEAGLSPAARLLVQHLADRARQHAKMEPATF*