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SCNpilot_expt_300_bf_scaffold_228_curated_102

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(108506..109012)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036628F8 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 167.0
  • Bit_score: 314
  • Evalue 8.80e-83
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:GAD23455.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 167.0
  • Bit_score: 314
  • Evalue 1.20e-82
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 169.0
  • Bit_score: 301
  • Evalue 1.40e-79

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGCCTACCGCCGCCTCTCCCCACCCCGAAGTCGCCCCCCTGTACACCGACCACCACGGCTGGCTGCAGGGCTGGCTGCGCAAGAAGCTCGGCGACGTGCACCAGGCGGCCGACCTGGCGCACGACACCTTCGTGCGCCTGCTGGCGCGCGAGGAGCCCGTGCAGGCGCGCGAGCCGCGCGCCTTCCTGACCACGGTGGCGCAGCGCGTGCTGGCCAACCACTACCGGCGCCAGCAACTGGAGCGCGCCTACCTGGAGGCGCTGGCCCAGGCGCCGCAGGCCGCCGCGCTGTCGCCCGAGGAGCGCGCGCTGCTGCTGGAGGCGCTGGACGAAATCGACCGCCTGCTCGACGGCCTGCCCGCGCCTGTGCGGCGCGCGTTCCTGATGGCCCAGCTCGACGGCATGAAGCAGGCCGAAATTGCGCGCGCGCTGGGCGTGTCGCTCACCACCGTCAAGCGCTACCTGGTGCAGGCGGGCATGCGCTGCTACTTCGCGGTGGCCGCATGA
PROTEIN sequence
Length: 169
MPTAASPHPEVAPLYTDHHGWLQGWLRKKLGDVHQAADLAHDTFVRLLAREEPVQAREPRAFLTTVAQRVLANHYRRQQLERAYLEALAQAPQAAALSPEERALLLEALDEIDRLLDGLPAPVRRAFLMAQLDGMKQAEIARALGVSLTTVKRYLVQAGMRCYFAVAA*