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SCNpilot_expt_300_bf_scaffold_322_curated_24

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 21359..22237

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 292.0
  • Bit_score: 584
  • Evalue 1.50e-164
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 292.0
  • Bit_score: 584
  • Evalue 6.50e-164
Diaminopimelate epimerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRX1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 292.0
  • Bit_score: 584
  • Evalue 4.60e-164

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCAGATCCGCTTCACCAAGATGCAGGGCGCGGGCAACGACTTCGTGGTGCTCGACGAGACCCGGGAGCGCCTGGGCCTCACGCCCGCGCAGTACCGCTTCCTGGCCGACCGCCACTTCGGCGTGGGGGCCGACCAGATCCTCACCGTGCGCCCCTCGCCCGCCGAGGGCATCGACTTCGAATACCTGATCCACAACGCCGACGGCGGCCAGGTGCAGCAGTGCGGCAACGGCGCGCGCTGCTTCGCGCGCTACGTGCGCGACAAGGGGCTCACCGCCAAGGACCGGATCCGCGTGCAGACCATGGCCGGCGTGATCGCGCCCGAGCTCACCGCCGACGGGCGCGTGACGGTGGACATGGGCCGCCCGGTGCTCGACCCCGCGCGCCTGCCGTTCGACACCGCGGGCCTCGTGCCCGTGCCGCAGGGTTCTGTACAAAAATGGCCTCTGGCGCTTGATGGGAAAGCGCCGCAAGCTACCGTAATGATAGTGGCCGTGTCCATGGGCAACCCGCATGCCGTGCAACTGGTCGATGACGTGGACAGCGCCCCCGTGGCCCGCACCGGCCCGCTGATCGAGGGCCACCCGCGCTTCCCGCAGCGCGTGAACGCGGGCTACCTGCAGGTCGTGGGCCGCACCGAGGTGCGCCTGCGCGTGTACGAGCGCGGCGCGGGCGAGACCCTGGCCTGCGGCACGGGCGCCTGCGCGGCCGTGGTCGCGGGCATAGGCCTGGGCCTGCTCGACGCGCGCGTGGACGTGCACGCGCGCGGCGGCCTGCTCACCATCGCCTGGGCCGGCGGGCTGGATGACCCCGTGTTCATGACCGGCCCCGCCACCACCGTTTTCGAAGGCCAGATCGACATTCCCGAGACACCATGA
PROTEIN sequence
Length: 293
MQIRFTKMQGAGNDFVVLDETRERLGLTPAQYRFLADRHFGVGADQILTVRPSPAEGIDFEYLIHNADGGQVQQCGNGARCFARYVRDKGLTAKDRIRVQTMAGVIAPELTADGRVTVDMGRPVLDPARLPFDTAGLVPVPQGSVQKWPLALDGKAPQATVMIVAVSMGNPHAVQLVDDVDSAPVARTGPLIEGHPRFPQRVNAGYLQVVGRTEVRLRVYERGAGETLACGTGACAAVVAGIGLGLLDARVDVHARGGLLTIAWAGGLDDPVFMTGPATTVFEGQIDIPETP*