name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_322_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..186)
|
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=12553236 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_2
unknown
|
Not on your lists |
614..1147
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_322_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1160..1864)
|
ABC transporter-like protein id=12553235 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1861..2583)
|
ABC transporter-like protein id=12553234 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2580..3557)
|
inner-membrane translocator id=12553233 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3574..4425)
|
inner-membrane translocator id=12553232 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4535..5314)
|
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
enoyl-CoA hydratase/isomerase id=12553231 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5320..6975)
|
cyclohexanecarboxylate-CoA ligase (EC:6.2.1.26); K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
Cyclohexanecarboxylate-CoA ligase {ECO:0000313|EMBL:AEB86424.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEB86424.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cyclohexanecarboxylate-CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G578_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7095..8252)
|
cyclohexanecarboxyl-CoA dehydrogenase; K04117 cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY8_ALIDB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO25022.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8272..9054)
|
2-ketocyclohexanecarboxyl-CoA hydrolase (EC:4.1.3.36); K07536 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-ketocyclohexanecarboxyl-CoA hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY7_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9098..9865)
|
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC:1.1.1.100); K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY6_ALIDB
Short chain CoA dehydrogenase {ECO:0000313|EMBL:GAO25020.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9996..10310
|
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY5_ALIDB
regulatory protein marr
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEB86420.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10488..12248)
|
FAD dependent oxidoreductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX7_ALIDB
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAO25011.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
FAD-dependent oxidoreductase; K07137
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12312..12608)
|
Plasmid stabilization system protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JRA9_PSEST
Plasmid stabilization system protein {ECO:0000313|EMBL:EPL63178.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12605..12820)
|
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JTX9_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EPL63179.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12881..13999)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003692EE2
Uncharacterized protein {ECO:0000313|EMBL:GAD21713.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
heat shock protein DnaJ domain-containing protein
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13962..14975)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003648A67
Predicted integral membrane protein {ECO:0000313|EMBL:GAD21712.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K07027
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14975..16186)
|
cardiolipin synthase 2; K06132 putative cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Phospholipase D/Transphosphatidylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFU0_ACIET
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_19
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16183..16950)
|
Endonuclease/exonuclease/phosphatase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC59_ACISJ
endonuclease/exonuclease/phosphatase; K06896
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACM34440.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17121..18038)
|
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cysteine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G564_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18148..18375
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86409.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18871..19596)
|
RNA-binding S4 domain-containing protein; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
RNA-binding S4 domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G562_ALIDK
RNA-binding S4 domain protein {ECO:0000313|EMBL:AEB86408.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
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SCNpilot_expt_300_bf_scaffold_322_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19589..21334)
|
NUDIX hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRX2_ALIDB
NUDIX hydrolase {ECO:0000313|EMBL:ADV01449.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
nudix hydrolase
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21359..22237
|
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7]
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Diaminopimelate epimerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRX1_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22234..22929
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX0_ALIDB
hypothetical protein; K09921 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO25004.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23023..23988
|
Tyrosine recombinase XerC n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW9_ALIDB
tyrosine recombinase xerc; K03733 integrase/recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
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SCNpilot_expt_300_bf_scaffold_322_curated_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24004..25719)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G556_ALIDK
integral membrane sensor signal transduction histidine kinase
|
|
SCNpilot_expt_300_bf_scaffold_322_curated_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25701..26066)
|
PAS sensor protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRW6_ALIDB
pas sensor protein
Pas sensor protein {ECO:0000313|EMBL:GAO25000.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
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|
SCNpilot_expt_300_bf_scaffold_322_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26095..26904)
|
Metal dependent phosphohydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G554_ALIDK
metal dependent phosphohydrolase; K07814 putative two-component system response regulator
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEB86400.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
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SCNpilot_expt_300_bf_scaffold_322_curated_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26901..27287)
|
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW4_ALIDB
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:GAO24998.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
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