ggKbase home page

SCNpilot_expt_300_bf_scaffold_470_curated_13

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17148..18407)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003044C09 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 397.0
  • Bit_score: 507
  • Evalue 1.30e-140
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 389.0
  • Bit_score: 361
  • Evalue 4.90e-97
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 410.0
  • Bit_score: 524
  • Evalue 1.10e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGTCAGTTGAAGCAGCAATCAAGACAGGTCTTCCAGGCATCTGGGTACACGGAAAATCCGTGCGCGTGGACTTCATGCACAGGGGCACGCGCCACCGCCATACGCTCGGCATCGAACCGACCGAGACAAACCTGCGCCATGCGGCTCACCTCCGAATTGCTGCGCTGTGCGCACTAAAGACCGGCAGTTACCGCGCGGCCGACTTCTTCCCTGACTCTTACCCGACTGATACCAGCAACCGGCCCAGCAAGCGCCTGTGTGACCTCTATGACGTCTACATGCCTTTGAAGGCCGCCGACATCACCGAGGAAACGCAGTCCCGCTATGAGGTGGCGCTCAACGCCTGCTTGAACACCATCGGCCGCGCTCGACGAATCGATGAGCTGATGCCCGCAGACATTCAGCAGTTGCGTGTAGACCTGATCGCGACGAGATCCGTTGCTACCGTCAACAACTACCTCACCACCTTCACGGGCTTTCTCCGCTGGTGTGAAGACAACGAGTATTGCGAAGGCCTGGCCAAGCACTGCACTCGCTTCACCAAGAGCCACAAGGAGCCCGATCCGTTCACCCATGCCGAATACCAAGTCTTGCTCGACAAAGGATGCCAGCATCCACTAACCCAGGCATCGTTGGTGCTTGCTTTCTATAGTGGCCTTCGACCAGGAGAACTGTGCGCCCTGGCTGTGGAGGACATCGCTCCCGATCTGAAGAGCTTGACCGTGCGCCGCTCCATCACGCGGTCCGGCGCCTTCAAGGTGCCCAAGAATGAAAGGGAGCGCACCGTGTTTCTTTTCCCTCCTGCCCAGGAAGCCTTGAAGGTACTCATCGCTGATGCAGAAACCCGCAACCCTGCAGATCTGCGCGTGTGGCTCAACCGGAGCGAATCCCGGATCGACCGCGCGCGACCCCTCAACATCGCGGGTTCGCCCAAGCACAAAAACGCAGTCAAGCACTCATATGTGCTCAGCGCATGGGGCAGTGAATGGCGCAATATCCTCCGCCGCGCAAAGGTGCGCCCTCGCCCACCTTATCAAACACGTCATACCTACGCGTGCTGGAGCCTGGCAGCAGGCGGCAACCTGGCGTTCGTCGCCACTCAAATGGGACATGCGGGCTACCTGACGTTCATAAAAATCTACGGCCGCTGGATCGAGTCGGCGTTTTCGAGCGAACCGCTGCGCACCTGGGCGAGCAAACATAATCTGGGAGAATTTGGGACAAATTTTTGTCCCAAGAGATCGAAGCAGAAAACGTAA
PROTEIN sequence
Length: 420
MSVEAAIKTGLPGIWVHGKSVRVDFMHRGTRHRHTLGIEPTETNLRHAAHLRIAALCALKTGSYRAADFFPDSYPTDTSNRPSKRLCDLYDVYMPLKAADITEETQSRYEVALNACLNTIGRARRIDELMPADIQQLRVDLIATRSVATVNNYLTTFTGFLRWCEDNEYCEGLAKHCTRFTKSHKEPDPFTHAEYQVLLDKGCQHPLTQASLVLAFYSGLRPGELCALAVEDIAPDLKSLTVRRSITRSGAFKVPKNERERTVFLFPPAQEALKVLIADAETRNPADLRVWLNRSESRIDRARPLNIAGSPKHKNAVKHSYVLSAWGSEWRNILRRAKVRPRPPYQTRHTYACWSLAAGGNLAFVATQMGHAGYLTFIKIYGRWIESAFSSEPLRTWASKHNLGEFGTNFCPKRSKQKT*