ggKbase home page

SCNpilot_expt_300_bf_scaffold_470_curated_14

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 19651..20862

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8N9_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 400.0
  • Bit_score: 356
  • Evalue 4.80e-95
Uncharacterized protein {ECO:0000313|EMBL:KHS13970.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 403.0
  • Bit_score: 559
  • Evalue 5.20e-156
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 400.0
  • Bit_score: 356
  • Evalue 1.50e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia multivorans → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGACCTGCGCATAGTCCGGGACGATCTGCAATACGCAGCGCTCCTTGAGCAGGCAAAAGAGCTGGCACTTCTAGATCCTCTACCAGAGAGCAACGAGGCTGAACGCTTGGCCTTAATTTCTGTGCTACTGGAAAAATATGAGGCCGAACAATTCAGGATCGAATCGCCTGATCCCGTTGATGCAATCATCTACAGGTTGGCGGAGCTTGGATTAAAACAAAAGGACTTAGCTGATATCCTTGGCAGCAAAAGTCGCGCTTCTGAGATATTGAGCAGAAAGCGTGATCTGACAGTTGACATGATTCGGTTGATACATGATGGTCTGAAAATTCCTGTAGAAGTCCTAATTGGAGAGCGAAAGCAAGAAGCTTCTCGAGACAAGGATATTGCCTGGGAAAAGTTTCCCGTGAAGGAAATGAAGAAGCGCGGTTGGTTAGATGTTGAAATTAAGGCGGGTCATACTGGTGAGCAGTTGATTCGATCATTTTTCGAGAGAACGGCTAGCCATCGATCGCCCGCCTTCTTTCGCAGAGCATTGAGCGGTTCTCTTAAAGAAGAGAGTCAATATGCTATCCATGCATGGATAGCTCGAGTTCTAATTAAGGCTAGAGAGTCTAAGCGCCCCGACGTGCGCTATGTTTCCGGCTCTATTACGGAAGAGTTTCTAAAACAACTGGCAAAGCTTAGCAGATCGGATGATGGCCCCTCACTTGCTCGAGAATTCCTCGCTATGAAGGGGATCATTTTGGTTGTGGAGCCACATCTTCCGAAAACATATCTTGATGGAGCCGCGATCTTGGATGAAGACGGAGTTCCTGTGGTAGGGCTCACGCTTCGCTATAACAGAGTGGATTACTTCTGGTTTACATTGATGCATGAGCTCGTGCATGTGCAGCGACATTTAGGTCGCCAGAATACAACCTTTGTCGATGAAGATGGAGTTGATGAGGGTGATGAGAAGGAGGCAGAAGCTAATATTTACGCCGCAGAAGCATTCATTCCTCGTCAAGTGTGGAGAAGCAGTGATGCTTGTCGTACCAAGAAAAGTGATGCTGTGTTGCGATTGGCAGAAGAACTAAAAATCCATCCTGCAATAGTTGCAGGGCGGATTCGGCGGGAGAGCAAAAATTACAGAATATTAGGCGAGTTCTTTAGCGAGACCCAGGATATTAGGAAGATTTTTGGCATCACAAATTCGAGTGACAAATGA
PROTEIN sequence
Length: 404
MDLRIVRDDLQYAALLEQAKELALLDPLPESNEAERLALISVLLEKYEAEQFRIESPDPVDAIIYRLAELGLKQKDLADILGSKSRASEILSRKRDLTVDMIRLIHDGLKIPVEVLIGERKQEASRDKDIAWEKFPVKEMKKRGWLDVEIKAGHTGEQLIRSFFERTASHRSPAFFRRALSGSLKEESQYAIHAWIARVLIKARESKRPDVRYVSGSITEEFLKQLAKLSRSDDGPSLAREFLAMKGIILVVEPHLPKTYLDGAAILDEDGVPVVGLTLRYNRVDYFWFTLMHELVHVQRHLGRQNTTFVDEDGVDEGDEKEAEANIYAAEAFIPRQVWRSSDACRTKKSDAVLRLAEELKIHPAIVAGRIRRESKNYRILGEFFSETQDIRKIFGITNSSDK*