ggKbase home page

SCNpilot_expt_300_bf_scaffold_568_curated_1

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3..1709)

Top 3 Functional Annotations

Value Algorithm Source
Putative receptor n=2 Tax=Pseudomonas stutzeri RepID=Q9L8Q7_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 552.0
  • Bit_score: 814
  • Evalue 5.30e-233
Putative receptor {ECO:0000313|EMBL:AAF33135.1}; Flags: Precursor;; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 552.0
  • Bit_score: 814
  • Evalue 7.50e-233
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 587.0
  • Bit_score: 629
  • Evalue 7.60e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGAAACATCCACTCGGCGCACTGCACCGCGCCATCCTGCTGGCCTTGCCAGCCTTTACGCAGCCCGTCGCCGCGCTTGCGCAGAATGCGGCGGAGGGCGCTCTTGAAGCTTCGGCGGCGGAATTGCCCGCCGTGACCATCACCGCCGACAAGGTGGCGCGGCCCTTGGAGAAGGTGCCCGCCAGCGTGGCCGTGGTGGACGGGCAGGATGCCGAGCAATCCGGCATCACCGCCATGGAGCAGCTCGAAGGCCGGGTGCCCGGCCTGTCGTTCCAGCCGTTCGGGCAGGCGGGCCTGAATTCCCCGGTCATGCGTGGGCTGACGGCCAACTTCAACAGCTATTCCACGTCCACGCTGCTGCTGGTCGATGGCGTGCCCACCTTGACGGCGCAGGGGTTCGAGCACGGCATGCAGGACCTGGATCGCATCGAGGTGCTGCGCGGGCCGCAGTCCACGCTGTACGGCCGCAACGCCGAGGCGGGCGTGATTGCGGTCCACAGCCTGCCCATGGATGGCGAGCCGCGCGGCAGCGTGGCCATGGAGGCGGGAAGCCGCGACAAGCGGGCACTGCTGTTCGCCTTCAGCCGTCCGCTGGTCGAAGACCGGCTGTATGCCAGCATCGCCGGCAACTGGACGGGCCAGGACGGGTTCATCCGCAACACGTACACGGGCCGCAAGGAGGATGACCGCGAGCGGCGCGACCTGCGCCTGGGCCTGCGGTGGACGCCGGGCGCGGCCACCGATGTGGTGCTGCGCTATGCGCGTTCGCAGTACGACGATGGCGCCACGCTGTGGGGCGCGCCTGCCGCGGCGCGTGCGCAGGTGGCATCCGGCACGCCGAGCTGGAACCGTTCCTGGGGCCAGACCCTTTCGCTGAAGGTGCAGCATGCGCTGGACTCCGGCCTGAAGCTGCATTCCATCACGGCCTGGAACGATTTCCGGGACCGCATTCAGCAGGACACGGACTTCCAGCCCATGGACATGCTGCACGTCGGGCGCAACAACCATTTGCGCACGCTGTCGCAGGAACTGCGGCTGGAAGGCCAGCAAGGCGCATCCGACTGGCTGGTCGGCCTGTACGGGGATCGCAGCGACAACGACCTGCAGGTGGCCAGCAAGACCATGATGGGCCTGTCGGACATCCGCGCCAGCCAGAAAGGCAGCACTGCAGCCCTCTTCACGAACTGGAACATGCCGCTGGCTGGCCACTGGTCGCTGTCCGCGGGCGCGCGCCTGGAGCGCATTGCCGTGGAGCTGTTGCCGCTCGACGCCGCGCGGCAGAAGAAGCACTGGACGAACTTCTCGCCCAGGCTCGCGCTGCAGTACCAGTTCATGCCCCGGCACCAGTGGTATGCCAGCGCCAGCAGGGGCGTTCGCACGGGCGGCTTCAATGTGCTGTCCCCGGCGATGAACTATCCCGCGTATGGGCCGGAGAAGGTCTGGTCGTACGAGACGGGCGTCAAGGGCGCGCTCATGGACAGGCGCATGCGCTACGCGCTGGCCGCCTATGTCATGGACATAGGCGACATGCAGGTCATGCAGATGCCCACGCCCGGCATGATGTACATCACCAGCGCTGCGAGCGCCACGTCCAAGGGAGCCGAACTGGATGTGGACTATCTGCTCGGCCGTGGCTGGCAACTGCGGGGCGGCGTGGCCTGGAACCGCACGCGCTTCGACCGTTTCGTCGATGGCGCCGCCGATTAC
PROTEIN sequence
Length: 569
MKHPLGALHRAILLALPAFTQPVAALAQNAAEGALEASAAELPAVTITADKVARPLEKVPASVAVVDGQDAEQSGITAMEQLEGRVPGLSFQPFGQAGLNSPVMRGLTANFNSYSTSTLLLVDGVPTLTAQGFEHGMQDLDRIEVLRGPQSTLYGRNAEAGVIAVHSLPMDGEPRGSVAMEAGSRDKRALLFAFSRPLVEDRLYASIAGNWTGQDGFIRNTYTGRKEDDRERRDLRLGLRWTPGAATDVVLRYARSQYDDGATLWGAPAAARAQVASGTPSWNRSWGQTLSLKVQHALDSGLKLHSITAWNDFRDRIQQDTDFQPMDMLHVGRNNHLRTLSQELRLEGQQGASDWLVGLYGDRSDNDLQVASKTMMGLSDIRASQKGSTAALFTNWNMPLAGHWSLSAGARLERIAVELLPLDAARQKKHWTNFSPRLALQYQFMPRHQWYASASRGVRTGGFNVLSPAMNYPAYGPEKVWSYETGVKGALMDRRMRYALAAYVMDIGDMQVMQMPTPGMMYITSAASATSKGAELDVDYLLGRGWQLRGGVAWNRTRFDRFVDGAADY