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SCNpilot_expt_300_bf_scaffold_1149_curated_2

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(1343..2398)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK10_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 357.0
  • Bit_score: 397
  • Evalue 1.30e-107
membrane-fusion protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 352.0
  • Bit_score: 343
  • Evalue 6.80e-92
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 352.0
  • Bit_score: 600
  • Evalue 1.80e-168

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGCGGCCCTGGCGGCCGACGAGTTCCCTGTCAGTGCTGCGCAGATGCAGTCCCTGGGCGTGCAAGTGCAGCGCCTTGAAAAGTCCAGCGAGTCGTCAGGCCAGACCTACTCTGCCCGCGTGGTACTTGCTCCTGGGCAGGAGCAGATTGCCAGCGCACCTCTTGCCGGCGTGGTGGATCAACTGCTCGTGGCTGAAAACGATGCCGTGAAGGCTGGGCAGCCGCTCATGCGATTGATCAGCCCCGAGCTGGGCGAGCTGCAGCTCAAGTTGATGGAAGTGGGCTCCAGCAGCCGCCTGTCCCAGAAGGCCTTGCAACGCGAGCGTCAACTCTTCTCAGAGGGGATCATTCCTGAACGGCGCGTACAGGAGGCAGAGGCCACCGCAGCCCAGGATGCGGCGCGCAAGCGTCAGGCGGAGGCGGCCCTCCGGCTCGCCGGTCTGGACAACGGCCGCATCCGCAGCATCGCCGAGGGCGGCAACGTAGAGACGAGTGTCACGGTGCGTGCCAAGGGCGCGGGATTGGTTGCCGATCTTTCCGTCAAGCCCGGTCAGCGCGTACAGCAGGCGGACCTGCTGATGCGCATCGCCAACCCCAGCAAGCTGGGCCTGGATATCCAGATTCCATCGGCCCGCACTGCGCAGCTCGCCACCGTGAAAGGCGCTGCCATCACCGTGGTGGGGCGCGATGGTGTGCAGGGCGAGGCACTTAGCGTGGGCCCCACCGTCAGCGACAACCAGATCCTTGTCCTCAAGGCAGCAATCACCAAGGGCGCCGAGCAGTTGCGCCCTGGTGAGATCCTGCAGGTGCAGGTTCCCTTTGCGGGTGGCCGCGAAGGCTGGACCGTGCCGCTGCCATCGGTAGTGCGCCAAGGCGACAAGGCCTATGTCTTTGTCCGCACGGAAAAAGGCTTTGTCGCCACCCCCGTCACGGTGCTCGCCAGCGCGGGGCAAACCATGCGCGTAACGGGCGGCCTGCAGGCGGGGCAGGAAATCGCCACTGCATCCGTGATCGCATTGAAGGCAGCGTGGCAGGGCAAGGGCGGGAGCAACTGA
PROTEIN sequence
Length: 352
MAALAADEFPVSAAQMQSLGVQVQRLEKSSESSGQTYSARVVLAPGQEQIASAPLAGVVDQLLVAENDAVKAGQPLMRLISPELGELQLKLMEVGSSSRLSQKALQRERQLFSEGIIPERRVQEAEATAAQDAARKRQAEAALRLAGLDNGRIRSIAEGGNVETSVTVRAKGAGLVADLSVKPGQRVQQADLLMRIANPSKLGLDIQIPSARTAQLATVKGAAITVVGRDGVQGEALSVGPTVSDNQILVLKAAITKGAEQLRPGEILQVQVPFAGGREGWTVPLPSVVRQGDKAYVFVRTEKGFVATPVTVLASAGQTMRVTGGLQAGQEIATASVIALKAAWQGKGGSN*