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SCNpilot_expt_300_bf_scaffold_523_curated_2

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(1044..2597)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CQS8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 422.0
  • Bit_score: 322
  • Evalue 9.90e-85
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 422.0
  • Bit_score: 322
  • Evalue 1.40e-84
outer membrane efflux protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 430.0
  • Bit_score: 309
  • Evalue 2.10e-81

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGGCGGGCGGCGACGCCGGCCGCCCCAGCACCTGGCGCGACCGCATCAACCCATTCCAAGACCCGCTGCGCACGGAGCCCGGCCCGCTGCGCCAGCCCTTGGCCGTGCCGCTGCCTCCCGACCTGCTGGCCGACCCACCCGGCGGCGCGGCAGGGCAGCCACCGGCCGCCGGTGGCCTGCTATCGACTGAATGGCCCTGCGCGACGCGCGCGACGGCAGGCAGCGCAGGCAGCCCGCAGCAGGCGCTGCTTCTGCTGCTGAATGCACAGTCCGGCGCTCCCGACCCGGCTGATCCATCGCCGCTGCTGAGCCTGCCCACCGCCATCCACCTGATGCTGTGCCACAACCCCCAGGTACGCGCCAGCTGGAGCGCCGTGGCCCAGCAGGCGGCGCAACTGGGGCAGGCCCGCAGTGCTTACCTGCCCCAGCTCTCTGCCGGCGCGGCCCGCCAGCGCAGCCGCGTCGGCTACAGCGGCGTCACTGTCCCGACGCAGACCACGTGGGCCACCCGACAACATGCCATCGTGAGCTGGCGCCTGTGGGACTTCGGTGCCCGCAGTGCGCGCGTCGATGCGGCGCAGGCCCAGCTGCAGGCGGGGCTGCGCTCCCAAGACACCACGGTCCGCCAGGTGCTGGGTGACGTGCTGCAGGCCTACGGCGAGGCCCAGGCCGCCCGTGCCCGCATGCTCACGCAGCGCAGCCTGCTGCCCCTGGCCGAACGAGGCGTGCTGGCGGCCGAGCGCCGAAAGTCCGGTGGCGCCGGCAGCGCCAATGACCAGCTCCAGGCCGCCACGGCGCTGGCGCGCACCAACCTTGAGCTCAGCCGCAGCCAGGGCGAACTCGACAAGGCCCACGCCCGGCTCGCCTACTTGACCGGCCTGCCGCCCGGCATCGCCTACAGAACCGAAGCGGCCGAGCCGTTGCCCGAGCCGGGCTCGCCAGCTCCAGGCGATGACCCGCACCAGCTTCTGACCCGCTCGCTGGACGAGTGGCTGGCCCAGGCATCGCAGAGCCACCCCGCCATCCAGTCGGCCAGGGCGCAATGGCAGGCCGCCCAGGCCAGCCTCAAGGCCGTGCAATCCGAAGGGTTGCCAACGCTGGACTTCAGTCTTGCGCACTACCGCAACGGCCGGCCCGACATGACCCTCACCGACAGCCGATCCCGCGAAAACGTGGTGGGGCTGACCCTGAACATCCCGTTGTTCGACGGCTTCGCCCACAGCTACAAAGTGCGCGCCGCCCAGGCCCTGGTGGAACAGAAAGCCGCTGAACTGCAGGCCACCGAACAGCAGGCGCTGCAGGACATCGTGCAACTGCACGCAGAGGCCCGCGCCGCGCTGAACAACCTGCAGGCCGCCCGCAGCCTGTTTGCCGTCTCCAGCGATGCGGCAGCGTCCTCGCAGCGGCAGTACGAGATGGGCGCTGCCGACATCGTCCAGCTCAACCAGAGCCTGGGCAATCTCCAGCAGGCCCAGTTGGAGCTGGCCCGAGGCCGCACCGACTGGAACAGGGCGCGGCTCAGGTTGTGGCTGCACGAAACGGTATCGCAATGA
PROTEIN sequence
Length: 518
MAGGDAGRPSTWRDRINPFQDPLRTEPGPLRQPLAVPLPPDLLADPPGGAAGQPPAAGGLLSTEWPCATRATAGSAGSPQQALLLLLNAQSGAPDPADPSPLLSLPTAIHLMLCHNPQVRASWSAVAQQAAQLGQARSAYLPQLSAGAARQRSRVGYSGVTVPTQTTWATRQHAIVSWRLWDFGARSARVDAAQAQLQAGLRSQDTTVRQVLGDVLQAYGEAQAARARMLTQRSLLPLAERGVLAAERRKSGGAGSANDQLQAATALARTNLELSRSQGELDKAHARLAYLTGLPPGIAYRTEAAEPLPEPGSPAPGDDPHQLLTRSLDEWLAQASQSHPAIQSARAQWQAAQASLKAVQSEGLPTLDFSLAHYRNGRPDMTLTDSRSRENVVGLTLNIPLFDGFAHSYKVRAAQALVEQKAAELQATEQQALQDIVQLHAEARAALNNLQAARSLFAVSSDAAASSQRQYEMGAADIVQLNQSLGNLQQAQLELARGRTDWNRARLRLWLHETVSQ*