name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_523_curated_1
unknown
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Not on your lists |
comp(25..261)
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This feature has no annotations |
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SCNpilot_expt_300_bf_scaffold_523_curated_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1044..2597)
|
Outer membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CQS8_9BURK
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
outer membrane efflux protein; K12340 outer membrane channel protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_3
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2719..4086)
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Type I secretion adaptor protein (HlyD family) n=1 Tax=Ralstonia syzygii R24 RepID=G3A8J9_9RALS
Type I secretion adaptor protein (HlyD family) {ECO:0000313|EMBL:CCA87573.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
type I secretion adaptor protein (hlyd family); K11003 hemolysin D
|
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SCNpilot_expt_300_bf_scaffold_523_curated_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4089..6371)
|
Type I (Cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region {ECO:0000313|EMBL:CBJ34632.1}; EC=3.6.3.43 {ECO:0000313|EMBL:CBJ34632.1};; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
cyaB; type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter transmembrane region (EC:3.6.3.43); K11004 ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Type I (Cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region n=1 Tax=Ralstonia solanacearum RepID=D8MZ49_RALSL
|
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SCNpilot_expt_300_bf_scaffold_523_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7177..7746
|
Lytic transglycosylase catalytic n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6M9_ALIDK
lytic transglycosylase catalytic subunit
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AEB85420.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
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SCNpilot_expt_300_bf_scaffold_523_curated_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7756..8400)
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ABC transporter, substrate-binding protein, aliphatic sulfonates family n=1 Tax=Acidovorax sp. CF316 RepID=J0KGH7_9BURK
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:EJE50333.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ABC transporter periplasmic protein; K15553 sulfonate transport system substrate-binding protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8987..10132)
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hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003661449
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAD21607.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
acd; acyl-CoA dehydrogenase
rbh
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SCNpilot_expt_300_bf_scaffold_523_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10132..11232)
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alkanesulfonate monooxygenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003658FE4
Coenzyme F420-dependent N5,N11-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:GAD21608.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
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SCNpilot_expt_300_bf_scaffold_523_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11445..11984
|
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=12550609 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
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SCNpilot_expt_300_bf_scaffold_523_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11958..13070)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371CB67
Uncharacterized protein {ECO:0000313|EMBL:GAD21609.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cytochrome c class I
|
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SCNpilot_expt_300_bf_scaffold_523_curated_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13117..13926)
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ABC transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003755FAF
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:GAD21610.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13920..14939)
|
sulfonate ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382C014
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:GAD21611.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ssuC2; ABC-type sulfonate transporter, permease component; K02050 NitT/TauT family transport system permease protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14936..15955)
|
ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D84BB
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:GAD21612.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
NMT1/THI5-like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16045..16677
|
UPI0003D3EBAE related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3EBAE
Predicted metal-dependent enzyme of the double-stranded beta helix superfamily {ECO:0000313|EMBL:GAD21613.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cysteine dioxygenase type I
|
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SCNpilot_expt_300_bf_scaffold_523_curated_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16674..18269
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A1C3C
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:GAD21614.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
rhodanese-like domain-containing protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18356..19315)
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CysB family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003673D06
Transcriptional regulator {ECO:0000313|EMBL:GAD21621.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
LysR family transcriptional regulator; K13635 LysR family transcriptional regulator, cys regulon transcriptional activator
|
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SCNpilot_expt_300_bf_scaffold_523_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19393..19608)
|
transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D18D2
molybdenum-pterin-binding protein
Molybdenum-pterin-binding protein {ECO:0000313|EMBL:AFU45750.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
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SCNpilot_expt_300_bf_scaffold_523_curated_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19646..20455)
|
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000256|HAMAP-Rule:MF_01724}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01724};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
taurine-transporting ATPase (EC:3.6.3.36); K15555 sulfonate transport system ATP-binding protein [EC:3.6.3.-]
sulfonate ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382F31A
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SCNpilot_expt_300_bf_scaffold_523_curated_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20510..21373)
|
sulfonate ABC transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CC1EB
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:GAD21625.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
binding-protein-dependent transport system inner membrane protein; K15554 sulfonate transport system permease protein
|
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SCNpilot_expt_300_bf_scaffold_523_curated_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21386..22561)
|
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alkanesulfonate monooxygenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037CA9B2
|
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SCNpilot_expt_300_bf_scaffold_523_curated_21
unknown
|
Not on your lists |
comp(22571..22678)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_523_curated_22
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22696..23670)
|
ABC transporter substrate-binding protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F9DA9A
ssuA; alkanesulfonates ABC transporter periplasmic protein; K15553 sulfonate transport system substrate-binding protein
Alkanesulfonates ABC transporter periplasmic protein {ECO:0000313|EMBL:EOA03618.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
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SCNpilot_expt_300_bf_scaffold_523_curated_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23796..24389)
|
FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
NADPH-dependent FMN reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D0E09
Predicted flavoprotein {ECO:0000313|EMBL:GAD21628.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
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SCNpilot_expt_300_bf_scaffold_523_curated_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24455..25474)
|
Sulfate ABC transporter, periplasmic sulfate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM8_ALIDB
sulfate ABC transporter periplasmic sulfate-binding protein; K02048 sulfate transport system substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ADU99551.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
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SCNpilot_expt_300_bf_scaffold_523_curated_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25600..25872
|
Probable Fe(2+)-trafficking protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM7_ALIDB
fe(ii) trafficking protein yggx
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
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SCNpilot_expt_300_bf_scaffold_523_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25944..26609
|
Uncharacterized protein family UPF0126 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWM6_ALIDB
uncharacterized protein family upf0126
Uncharacterized protein family UPF0126 {ECO:0000313|EMBL:ADU99549.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
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SCNpilot_expt_300_bf_scaffold_523_curated_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27551..28426
|
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM5_ALIDB
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|SAAS:SAAS00084295}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
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SCNpilot_expt_300_bf_scaffold_523_curated_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29011..29601
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM4_ALIDB
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ADU99547.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
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SCNpilot_expt_300_bf_scaffold_523_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29628..31415
|
nitrite and sulfite reductase 4Fe-4S region; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6P8_ALIDK
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:AEB85439.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
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SCNpilot_expt_300_bf_scaffold_523_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31477..31872
|
Uncharacterized conserved protein UCP030820 n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM2_ALIDB
uncharacterized conserved protein ucp030820
Uncharacterized conserved protein UCP030820 {ECO:0000313|EMBL:ADU99545.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
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