ggKbase home page

SCNpilot_expt_300_bf_scaffold_319_curated_24

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(25516..26355)

Top 3 Functional Annotations

Value Algorithm Source
squalene synthase hpnd (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32] similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 279.0
  • Bit_score: 552
  • Evalue 1.00e-154
Squalene synthase HpnD {ECO:0000313|EMBL:ADV00719.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ADV00719.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 279.0
  • Bit_score: 552
  • Evalue 4.40e-154
Squalene synthase HpnD n=2 Tax=Alicycliphilus denitrificans RepID=E8TWS9_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 279.0
  • Bit_score: 552
  • Evalue 3.20e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAATCCCGACCAGTACGTGCAGCAAAAGGCGGCCGCCTCCGGCAGCAGCTTCTACTACGCCTTTCTGTTCCTGCCACGCCAGCGCCGCGCGGCCATCACGGCCTTCTACGCCTTCTGCCGCGAGGTGGACGACGTGGTGGACGACGTCTCCGACCCGAGCGTTGCCCAGGCCAAGCTCGCCTGGTGGCAGGGCGAGGTGGCGCAGGCCTTCGCCGGCCGGCCCAGCCACCCGGTGATGCAGGCGCTGATGCCGCACGTGCCCGCCTACGGCATAGAGCAGGGCCAGCTGCAGGCCGTGATCGAGGGCTGCCAGATGGACCTGGAGCAGACGCGCTACCTCGACTTCGCGGGCCTGGCGCGCTACTGCCACCTGGTGGCCGGCGTGGTGGGCGAGGTGGCGGCGCACATCTTCGGGCAGACCGACGAGCGCACCACCGCATACGCCCACAAGCTGGGGCTGGCGTTCCAGCTCACCAACATCATCCGCGACGTGGGCGAGGACGCCATGCGCGGGCGCATCTACCTGCCCATCGCCGAGCTGCAGCAGTTCGACGTCAAGGCACACGAGATCACCCGGCGCGAGTATTCGGACCGCTTCACCGCGCTCATGCGCTTCCAGGCCGAGCGCGCCCACCGGCTCTACGACGAGGCCCTGGCCCTGCTGCCCGACGCCGACCGCCGCGCGCAGAAGCCCGGCCTGATGATGGCGAGCATCTACCGCACGCTGCTCGCCGAGATCGAGGCCGACGGCTTCCAGGTGCTGCACCAGCGCACCAGCCTCACGCCGCTGCGCAAGTTCTGGCTGGCGTGGAAGGTGCAGGCGCTCGGGCGCATGTAG
PROTEIN sequence
Length: 280
MNPDQYVQQKAAASGSSFYYAFLFLPRQRRAAITAFYAFCREVDDVVDDVSDPSVAQAKLAWWQGEVAQAFAGRPSHPVMQALMPHVPAYGIEQGQLQAVIEGCQMDLEQTRYLDFAGLARYCHLVAGVVGEVAAHIFGQTDERTTAYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPIAELQQFDVKAHEITRREYSDRFTALMRFQAERAHRLYDEALALLPDADRRAQKPGLMMASIYRTLLAEIEADGFQVLHQRTSLTPLRKFWLAWKVQALGRM*