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SCNpilot_expt_300_bf_scaffold_319_curated_25

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26473..27351)

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase HpnC n=2 Tax=Alicycliphilus denitrificans RepID=E8TWS8_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 292.0
  • Bit_score: 552
  • Evalue 1.90e-154
squalene synthase hpnc similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 292.0
  • Bit_score: 552
  • Evalue 6.10e-155
Squalene synthase HpnC {ECO:0000313|EMBL:ADV00718.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 292.0
  • Bit_score: 552
  • Evalue 2.70e-154

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
GTGAACGCCCGACCATCCCCGCAGCCCGCCGCCGCGCCCACCCGGGCAGCGCCGGTCACGCATTACGAGAACTTCCCCGTCGCCTCGCTGCTGTGCCCGCCGCGCCTGCGCCAGCCGATCGCCGCCATCTACGCCTTCGCGCGCACGGCCGACGACATCGCCGACGAGGGCGAGACTTGCCCCGGCGAGCGCCTGGCCGACCTGCGCGCCTACCGCGCCGAGCTGCACTCCATCGCCGCCGGCCACCTGCCCGGGCCGCGCTGGGCCTTTGTCTTCGGCCCGCTGCAGGCCACGCTGCACGGCCACCGGCTGCCCGTGGCGCTGCTCGACGACCTGCTCGACGCCTTCATGCAGGACGTGGCCATGACCCGGGACGACGCCACCCATGCCGACCGCGCCGCGCTGCTCGACTACTGCCGCCGCTCGGCCAACCCCGTGGGCCGGCTGCTGCTGCACCTGTATGGAGTGCACGGCGACGCGGCCCTGCGCGAGAGCGACGCCATCTGCAGCGCCCTGCAGCTCATCAACTTCTGGCAGGACCTGAGCGTGGACCTGCCGCGCGGCCGCCACTACCTGACGGACGCCGACTGCGCGGCCCACGGCGTGGAGCGCGCCGACCTCGCCGCGCTGCGGCGCACGCCCGCGAGCGACCGCCTCGTCCTCGACTGCGCCGCCTGGGCGCGGGGCCTCATGCTGCAGGGCGCGCCGCTGGTGCGCCGCCTGCCCGGCCGCGCGGGCTGGGAGCTGCGCCTGGTGGTGCAGGGCGGCCTGCGCATCCTCGACAAGGTGCAGGCCCTGGGCGGCGCCAGCCTGACCACCCGGCCCCGGCTGGGCGCGCCGGACTGGCTGCGCATGCTGGCGCGCGCCGTGCGCATGTAG
PROTEIN sequence
Length: 293
VNARPSPQPAAAPTRAAPVTHYENFPVASLLCPPRLRQPIAAIYAFARTADDIADEGETCPGERLADLRAYRAELHSIAAGHLPGPRWAFVFGPLQATLHGHRLPVALLDDLLDAFMQDVAMTRDDATHADRAALLDYCRRSANPVGRLLLHLYGVHGDAALRESDAICSALQLINFWQDLSVDLPRGRHYLTDADCAAHGVERADLAALRRTPASDRLVLDCAAWARGLMLQGAPLVRRLPGRAGWELRLVVQGGLRILDKVQALGGASLTTRPRLGAPDWLRMLARAVRM*