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SCNpilot_expt_300_bf_scaffold_861_curated_10

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 7432..8340

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4M9_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 300.0
  • Bit_score: 326
  • Evalue 4.00e-86
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 300.0
  • Bit_score: 326
  • Evalue 1.30e-86
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACB33468.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 300.0
  • Bit_score: 326
  • Evalue 5.60e-86

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCGAACCGAACCGGGCACAGTGCGCAATTTCGCGCTCTATGGCACCAGTGACGATGCTCCGGCCTGGGCCGACCTGGTGCACCTGGAGCGCATCGTCGAGCGCTCCAGCCTCTTCGACTGGGAGATCGACCTGCACTTCCACGCCGGGCTGATCCAGGTGCTCTATCTCACCGCCGGCGGCGATCATGGTTCTGCGTTGATCGATGGCATGCGCTGGACCTTGCGCACGCCCTGCCTGATCGTGGTGCCGGCGCGGGCCGTGCATGGCTTCAGCTTCCAGCCCGGTACGGACGGTCCGGTGATCACGGCCGCGCAAAAACCGCTGGAGTCCCTGGCCGATGTGGCCGCGCCCGAGTTGCTGGGATACATGCGTCGCCCGGTAGTGCTGGAGGTCAACGCCGAGGGGCGCCAGGCGCAGGCGCTGCTGACGCTATTCGAAGCCATCGCTCATGAATCGCAGGTGGGCGGCGGTGGCATGGCCGCAGGTATGGCGCTGTTGCTGGCACTGTTCGTGCAGATCGCGCGCATCGCGCGTGGTGCGGAGGCCCTGCCGGAAGCGGTTCGCTCGCGCAAGGCGGCCCAGATAGAGCGCTTCCGGGTGCTGCTTGATGCGCGCGTGCGTGAACGCGCGCCGGTGCATGCCTATGCGGATGCGTTGGGTATCTCGGTGGGACAGCTGACACGGCTGTGCCGTGAGCTGCTCGGGGTCTCGGCCCAGGAAGCGATCAACGCCCGGGTCGTGCATGAGGCTCAGCGTGAGCTGGTCTATTCTTCGCTTTCGATCAAGCAGATCGCGGCCGAATTGGGTTTCGAGGACGAGGCCTACTTTGGCCGTTTCTTCAAAAAACACACGGGCCAGCGTCCGACCGTCTTTCGCGTACAGGCTCGCCAGCAATTGGCTGCGTAG
PROTEIN sequence
Length: 303
MRTEPGTVRNFALYGTSDDAPAWADLVHLERIVERSSLFDWEIDLHFHAGLIQVLYLTAGGDHGSALIDGMRWTLRTPCLIVVPARAVHGFSFQPGTDGPVITAAQKPLESLADVAAPELLGYMRRPVVLEVNAEGRQAQALLTLFEAIAHESQVGGGGMAAGMALLLALFVQIARIARGAEALPEAVRSRKAAQIERFRVLLDARVRERAPVHAYADALGISVGQLTRLCRELLGVSAQEAINARVVHEAQRELVYSSLSIKQIAAELGFEDEAYFGRFFKKHTGQRPTVFRVQARQQLAA*