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SCNpilot_cont_1000_p_scaffold_379_curated

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_379_curated_1

Not on your lists

704..910
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BDZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD72262.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_379_curated_2

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926..2332
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6R7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD69787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NoeA host specific nodulation protein
SCNpilot_cont_1000_p_scaffold_379_curated_3
unknown

Not on your lists

2332..4443
DNA (2112bp) protein (704aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_379_curated_4
Rickettsia australis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4594..5460
DNA (867bp) protein (289aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rickettsia australis (strain Cutlack) RepID=H8K7Z6_RICAC
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AFC71389.1}; TaxID=1105110 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia australis (strain Cutlack).;"
SCNpilot_cont_1000_p_scaffold_379_curated_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5466..6512
DNA (1047bp) protein (349aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
Putative polysaccharide biosynthesis protein CapE-like n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G489_HERAR
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KIF58351.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
SCNpilot_cont_1000_p_scaffold_379_curated_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6543..7667
DNA (1125bp) protein (375aa)
wecB; UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Legionella longbeachae RepID=D3HNT2_LEGLN
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KJZ35950.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
SCNpilot_cont_1000_p_scaffold_379_curated_7
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7664..8494
DNA (831bp) protein (277aa)
ABC-2 protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6D5_NITMU
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
SCNpilot_cont_1000_p_scaffold_379_curated_8
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8484..9869
DNA (1386bp) protein (462aa)
teichoic-acid-transporting AtPase (EC:3.6.3.40); K09691 lipopolysaccharide transport system ATP-binding protein
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0P3_PSEUO
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKD32783.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
SCNpilot_cont_1000_p_scaffold_379_curated_9
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9866..10738
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Vibrio mimicus SX-4 RepID=G0SRI3_VIBMI
Methyltransferase domain protein {ECO:0000313|EMBL:KFE30302.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
type 11 methyltransferase
SCNpilot_cont_1000_p_scaffold_379_curated_10
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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10740..11867
DNA (1128bp) protein (376aa)
Glycosyl transferase family 2 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M559_GEODF
family 2 glycosyl transferase
Tax=BJP_IG2158_Nitrospirales_45_240
SCNpilot_cont_1000_p_scaffold_379_curated_11
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11938..13227
DNA (1290bp) protein (430aa)
glycosyltransferase-like protein n=1 Tax=Holospora undulata RepID=UPI00032E8369
Glycosyl transferases group 1 {ECO:0000313|EMBL:ETZ04404.1}; TaxID=1321371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
glycosyltransferase-like protein
SCNpilot_cont_1000_p_scaffold_379_curated_12
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13224..14543
DNA (1320bp) protein (440aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W887_METEP
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABY32085.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
SCNpilot_cont_1000_p_scaffold_379_curated_13
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14530..15669
DNA (1140bp) protein (380aa)
Glycosyltransferase n=2 Tax=Geobacter sulfurreducens RepID=E1PTG7_GEOSK
glycosyltransferase, group 2 family protein
Tax=BJP_IG2158_Nitrospirales_45_240
SCNpilot_cont_1000_p_scaffold_379_curated_14
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15826..16530
DNA (705bp) protein (235aa)
Glycosyl transferase family 2 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXN9_DESFR
two-domain glycosyltransferase
Tax=BJP_IG2158_Nitrospirales_45_240
SCNpilot_cont_1000_p_scaffold_379_curated_15
Rickettsia canadensis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16531..17577
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rickettsia canadensis str. CA410 RepID=H6PFA3_RICCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV73686.1}; TaxID=293613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" source="Rickettsia canadensis (strain McKiel).;"
SCNpilot_cont_1000_p_scaffold_379_curated_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17574..18800
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00037DFEE1
Uncharacterized protein {ECO:0000313|EMBL:KJZ35958.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
glycosyltransferase
SCNpilot_cont_1000_p_scaffold_379_curated_17
unknown

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comp(19446..19817)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_379_curated_18
unknown

Not on your lists

comp(20245..20850)
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_379_curated_19
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21255..22430)
DNA (1176bp) protein (392aa)
CaiB n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN28_RHOCS
CoA transferase {ECO:0000313|EMBL:EWY41880.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
CaiB
SCNpilot_cont_1000_p_scaffold_379_curated_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22433..22861)
DNA (429bp) protein (143aa)
peptidylprolyl isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137G9_RHOPS
SCNpilot_cont_1000_p_scaffold_379_curated_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22858..23862)
DNA (1005bp) protein (335aa)
prolyl aminopeptidase (EC:3.4.11.5); K01259 proline iminopeptidase [EC:3.4.11.5] id=12497489 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
proline iminopeptidase; K01259 proline iminopeptidase [EC:3.4.11.5]
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_1000_p_scaffold_379_curated_22
unknown

Not on your lists

comp(23879..24130)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_379_curated_23
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24396..24797
DNA (402bp) protein (134aa)
Membrane protein id=4908857 bin=GWC2_Alphaproteobacteria_42_16 species=Enterococcus asini genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_379_curated_24
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24816..25280
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EIK2_9BACT
dps; starvation-inducible DNA-binding protein; K04047 starvation-inducible DNA-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_379_curated_25

Not on your lists

comp(25270..26220)
DNA (951bp) protein (317aa)
protein chain release factor B (EC:3.1.1.29); K02836 peptide chain release factor 2
protein chain release factor B id=4908854 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_379_curated_26
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(26458..26727)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000363E26B
transcriptional regulator; K07726 putative transcriptional regulator
Tax=RBG_16_Planctomycetes_43_13_curated
SCNpilot_cont_1000_p_scaffold_379_curated_27
R_Gammaproteobacteria_43_28, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26833..27114)
DNA (282bp) protein (94aa)
Endo/excinuclease amino terminal domain protein id=2604117 bin=GWC1_CPR2_39_9 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
excinuclease ABC subunit C; K07461 putative endonuclease
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_43_28_curated
SCNpilot_cont_1000_p_scaffold_379_curated_28

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comp(27343..29283)
DNA (1941bp) protein (647aa)
acetyl-CoA carboxylase, biotin carboxylase; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EUG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09319.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_379_curated_29
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29490..29960)
DNA (471bp) protein (157aa)
hypothetical protein COdytL_10560 id=4908848 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_379_curated_30

Not on your lists

comp(29982..31514)
DNA (1533bp) protein (511aa)
Acetyl-CoA carboxylase, carboxyltransferase component; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Propionyl-CoA carboxylase, beta chain id=4908846 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE09945.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 169 in total

View Taxonomy