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SCNpilot_cont_1000_p_scaffold_1354_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1354_curated_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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183..3446
DNA (3264bp) protein (1088aa)
ankyrin and tpr repeat domain protein id=4649249 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Ankyrin repeat domain protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1354_curated_2

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3456..6512
DNA (3057bp) protein (1019aa)
ankyrin and tpr repeat domain protein id=4649249 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKE10469.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ankyrin and tpr repeat domain-containing protein
SCNpilot_cont_1000_p_scaffold_1354_curated_3
unknown

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6708..6806
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_4
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6915..7400
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0W3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV41427.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
SCNpilot_cont_1000_p_scaffold_1354_curated_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7712..7972)
DNA (261bp) protein (87aa)
Conjugal transfer protein TraD id=4537104 bin=GWC2_Alphaproteobacteria_42_16 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1354_curated_6

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7999..9255
DNA (1257bp) protein (419aa)
MobA/MobL protein n=1 Tax=uncultured bacterium RepID=K2FFA3_9BACT
MobA/MobL protein {ECO:0000313|EMBL:EKE09345.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
MobA/MobL protein
SCNpilot_cont_1000_p_scaffold_1354_curated_7
unknown

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9626..9799
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_8
unknown

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9883..10986
DNA (1104bp) protein (368aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_9

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11377..11715
DNA (339bp) protein (113aa)
hypothetical protein id=71756 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD65482.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1354_curated_10

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11715..12002
DNA (288bp) protein (96aa)
helix-turn-helix domain protein; K07726 putative transcriptional regulator id=71758 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD65483.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K07726 putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1354_curated_11
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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comp(12463..16179)
DNA (3717bp) protein (1239aa)
hypothetical protein n=3 Tax=Vibrio splendidus RepID=UPI0002E04050
Skt5p {ECO:0000313|EMBL:EXX60491.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1354_curated_12
unknown

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16416..16610
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_13
unknown

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17144..17455
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_14
unknown

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comp(17629..18783)
DNA (1155bp) protein (385aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_15
unknown

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comp(18780..18956)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_16
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19191..20279)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein id=1896106 bin=GWE2_Gammaproteobacteria_37_16 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
hypothetical protein
Tax=GWE2_Gammaproteobacteria_37_16_curated
SCNpilot_cont_1000_p_scaffold_1354_curated_17
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20488..21765)
DNA (1278bp) protein (426aa)
Phage integrase family protein n=4 Tax=Coxiella burnetii RepID=B6J2G7_COXB2
phage integrase family protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_11_curated
SCNpilot_cont_1000_p_scaffold_1354_curated_18
unknown

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comp(21779..21910)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_19
unknown

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comp(21907..22047)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_20
unknown

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comp(22177..23070)
DNA (894bp) protein (298aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_curated_21
unknown

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23537..23683
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 21 items

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