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SCNpilot_cont_1000_p_scaffold_4351_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4351_curated_1

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comp(313..1074)
DNA (762bp) protein (254aa)
Erythrocyte adducin alpha subunit id=3959759 bin=GWC2_Alphaproteobacteria_42_16 species=Rickettsia bellii genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE10516.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4351_curated_2
unknown

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comp(1317..1511)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4351_curated_3

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comp(1842..2408)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ELT8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10517.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conserved protein of unknown function; putative DD-peptidase domain
SCNpilot_cont_1000_p_scaffold_4351_curated_4
unknown

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2692..3246
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4351_curated_5

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3432..4211
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ET47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE08889.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative ABC transporter (ATP-binding protein)
SCNpilot_cont_1000_p_scaffold_4351_curated_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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4211..5587
DNA (1377bp) protein (459aa)
DNA repair protein radA n=1 Tax=uncultured bacterium RepID=K2FDW0_9BACT
radA; DNA repair protein; K04485 DNA repair protein RadA/Sms
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_4351_curated_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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5590..6273
DNA (684bp) protein (228aa)
colicin V production protein id=3645212 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
colicin V production protein; K03558 membrane protein required for colicin V production
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_4351_curated_8

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6251..6979
DNA (729bp) protein (243aa)
Putative Short-chain dehydrogenase/reductase id=3645210 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKE08893.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_p_scaffold_4351_curated_9
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6996..7961)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Acinetobacter bereziniae NIPH 3 RepID=N8XHG8_ACIBZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_cont_1000_p_scaffold_4351_curated_10
unknown

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comp(8013..8474)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4351_curated_11
Rickettsia japonica, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8546..9118)
DNA (573bp) protein (191aa)
def3; polypeptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=652620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia japonica (strain ATCC VR-1363 / YH).;"
Peptide deformylase n=1 Tax=Rickettsia japonica (strain ATCC VR-1363 / YH) RepID=G4KLW9_RICJY
Displaying 11 items

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