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SCNpilot_cont_1000_p_scaffold_768_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_768_curated_1
R_Coxiella_42_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1120
DNA (1119bp) protein (373aa)
amino acid adenylation domain-containing protein (EC:5.1.1.3 1.3.1.10)
Amino acid adenylation domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IYP8_NOSP7
Tax=RIFCSPHIGHO2_12_FULL_Coxiella_42_15_curated
SCNpilot_cont_1000_p_scaffold_768_curated_2
unknown

Not on your lists

1364..1519
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_3

Not on your lists

1538..2782
DNA (1245bp) protein (415aa)
MFS transporter n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BD8A
Uncharacterized protein {ECO:0000313|EMBL:EKE10073.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
major facilitator transporter; K03762 MFS transporter, MHS family, proline/betaine transporter
SCNpilot_cont_1000_p_scaffold_768_curated_4
unknown

Not on your lists

2848..3099
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_5
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3146..4408)
DNA (1263bp) protein (421aa)
MFS transporter n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7EC8
Major facilitator family transporter {ECO:0000313|EMBL:CEG58971.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_768_curated_6
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4649..4990
DNA (342bp) protein (114aa)
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1359194 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" source="Rickettsia bellii str. RML Mogi.;"
Putative pterin-4-alpha-carbinolamine dehydratase n=2 Tax=Rickettsia bellii RepID=PHS_RICB8
SCNpilot_cont_1000_p_scaffold_768_curated_7
Saccharibacter sp. AM169, Saccharibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5496..5870)
DNA (375bp) protein (125aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1343158 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Saccharibacter.;" source="Saccharibacter sp. AM169.;"
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Formamidopyrimidine-DNA glycosylase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RX79_9RHOB
SCNpilot_cont_1000_p_scaffold_768_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5937..8126)
DNA (2190bp) protein (730aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Putative exodeoxyribonuclease V alpha chain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJP9_AZOBR
recD; putative exodeoxyribonuclease V alpha chain
SCNpilot_cont_1000_p_scaffold_768_curated_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8189..10036)
DNA (1848bp) protein (616aa)
ABC transporter (EC:3.6.3.27); K06147 ATP-binding cassette, subfamily B, bacterial
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3F8_9PROT
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components {ECO:0000313|EMBL:CAM77415.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
SCNpilot_cont_1000_p_scaffold_768_curated_10
unknown

Not on your lists

comp(9999..10148)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_11
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10102..14478)
DNA (4377bp) protein (1459aa)
ATP-dependent RecD-like DNA helicase {ECO:0000313|EMBL:KKB96217.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KKB96217.1};; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
Ti-type conjugative transfer relaxase TraA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A9F3
traA; putative conjugal transfer protein TraA
SCNpilot_cont_1000_p_scaffold_768_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14826..15623
DNA (798bp) protein (266aa)
transposase IS4 family protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BB44
Uncharacterized protein {ECO:0000313|EMBL:AIL13890.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
IS5 family transposase
SCNpilot_cont_1000_p_scaffold_768_curated_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15834..17372
DNA (1539bp) protein (513aa)
pre-mRNA-splicing ATP-dependent RNA helicase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXC9_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_768_curated_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17383..18126)
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=4536997 bin=GWC2_Alphaproteobacteria_42_16 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_768_curated_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18302..18475
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL15_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_768_curated_16

Not on your lists

comp(18590..19147)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EH87_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09528.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_768_curated_17

Not on your lists

19204..19410
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10191.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_768_curated_18
unknown

Not on your lists

19653..20816
DNA (1164bp) protein (388aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_19
unknown

Not on your lists

20816..21262
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_20
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

21266..23155
DNA (1890bp) protein (630aa)
Conjugal transfer protein traG id=4908488 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Brucella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative DNA-binding protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
SCNpilot_cont_1000_p_scaffold_768_curated_21
unknown

Not on your lists

23476..23919
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_22
unknown

Not on your lists

23859..24779
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_768_curated_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25003..25557
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=T5KI04_STEMA
UDP-N-acetylglucosamine acyltransferase {ECO:0000313|EMBL:KGF83420.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_768_curated_24
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25615..26013)
DNA (399bp) protein (133aa)
Plasmid mobilization system relaxase id=3886380 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_768_curated_25

Not on your lists

comp(26083..26403)
DNA (321bp) protein (107aa)
Plasmid mobilization system relaxase id=3886380 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
MobA/MobL protein {ECO:0000313|EMBL:EKE09478.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_768_curated_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26409..26921)
DNA (513bp) protein (171aa)
Plasmid mobilization system relaxase id=3886380 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
MobA/MobL protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_768_curated_27

Not on your lists

comp(26879..27358)
DNA (480bp) protein (160aa)
MobA/MobL protein n=1 Tax=uncultured bacterium RepID=K2FFA3_9BACT
MobA/MobL protein {ECO:0000313|EMBL:EKE09345.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
MobA/MobL protein
SCNpilot_cont_1000_p_scaffold_768_curated_28
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(27558..28307)
DNA (750bp) protein (250aa)
tal; transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Leptospirillum rubarum RepID=A3ET51_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
SCNpilot_cont_1000_p_scaffold_768_curated_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28427..29053)
DNA (627bp) protein (209aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Rhizobium sp. CF142 RepID=J2LBD2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIL12490.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
HAD superfamily hydrolase
SCNpilot_cont_1000_p_scaffold_768_curated_30
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29171..30022)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KM58_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAN52564.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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