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SCNpilot_cont_1000_p_scaffold_876_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_876_curated_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(613..780)
DNA (168bp) protein (56aa)
id=4908492 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_2
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(945..2210)
DNA (1266bp) protein (422aa)
DNA repair nucleotidyltransferase/DNA polymerase id=4086338 bin=GWA2_Ignavibacteria-rel_35_8 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
SOS mutagenesis and repair protein UmuC {ECO:0000313|EMBL:KIF15012.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
UMUC domain-containing protein DNA-repair protein; K03502 DNA polymerase V
SCNpilot_cont_1000_p_scaffold_876_curated_3
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2207..2764)
DNA (558bp) protein (186aa)
DNA polymerase V n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B70594
SOS response transcriptional repressor, RecA-mediated autopeptidase
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
SCNpilot_cont_1000_p_scaffold_876_curated_4
unknown

Not on your lists

3008..3235
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_5
unknown

Not on your lists

comp(3302..3544)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3870..4169
DNA (300bp) protein (100aa)
Uncharacterized protein id=3895502 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_7

Not on your lists

4166..4666
DNA (501bp) protein (167aa)
Acetyltransferase (GNAT) family protein n=1 Tax=uncultured bacterium RepID=K2DW84_9BACT
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:EKE10041.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acetyltransferase (GNAT) family protein
SCNpilot_cont_1000_p_scaffold_876_curated_8
R_Coxiella_42_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4779..5273
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVZ6_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Coxiella_42_15_curated
SCNpilot_cont_1000_p_scaffold_876_curated_9
unknown

Not on your lists

5386..5559
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_10
Orientia tsutsugamushi, Orientia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5633..7405)
DNA (1773bp) protein (591aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Orientia tsutsugamushi (strain Ikeda) RepID=B3CRJ0_ORITI
ABC transporter family protein {ECO:0000313|EMBL:KJV56954.1}; TaxID=1359186 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia.;" source="Orientia tsutsugamushi str. Kato PP.;"
ABC transporter permease/ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_1000_p_scaffold_876_curated_11

Not on your lists

7612..7833
DNA (222bp) protein (74aa)
Orf3 protein n=1 Tax=Wolbachia phage WO RepID=Q9JMP5_9VIRU
phage protein
Gp17 protein {ECO:0000313|EMBL:BAA89641.1}; TaxID=112596 species="Viruses; unclassified phages.;" source="Wolbachia phage WO.;"
SCNpilot_cont_1000_p_scaffold_876_curated_12
Wolbachia endosymbiont of Drosophila simulans, Wolbachia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7851..8669
DNA (819bp) protein (273aa)
Phage uncharacterized protein n=2 Tax=Wolbachia pipientis wMel RepID=Q73IF0_WOLPM
Uncharacterized protein {ECO:0000313|EMBL:CDR78616.1}; TaxID=225364 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.;" source="Wolbachia endosymbiont of Drosophila simulans wAu.;"
phage uncharacterized protein
SCNpilot_cont_1000_p_scaffold_876_curated_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8773..9057
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=uncultured bacterium RepID=K2DSL7_9BACT
chaperonin Cpn10; K04078 chaperonin GroES
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9091..10734
DNA (1644bp) protein (548aa)
60 kDa chaperonin id=2744884 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
groL2; 60 kDa chaperonin 2; K04077 chaperonin GroEL
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10863..11111
DNA (249bp) protein (83aa)
id=2744887 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_16
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11303..12799)
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E8B0_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV27664.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_876_curated_17
unknown

Not on your lists

comp(13287..14213)
DNA (927bp) protein (309aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_18

Not on your lists

comp(14311..14907)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=uncultured bacterium RepID=K2EH75_9BACT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
recR; recombination protein; K06187 recombination protein RecR
SCNpilot_cont_1000_p_scaffold_876_curated_19

Not on your lists

comp(15182..15508)
DNA (327bp) protein (109aa)
Nucleoid-associated protein Rru_A3472 id=2745107 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Nucleoid-associated protein ACD_16C00234G0004 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K09747 hypothetical protein
SCNpilot_cont_1000_p_scaffold_876_curated_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15526..17115)
DNA (1590bp) protein (530aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunits gamma and tau id=2745115 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_21
unknown

Not on your lists

comp(17339..17548)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_22
unknown

Not on your lists

comp(17592..17819)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_23

Not on your lists

comp(17848..18654)
DNA (807bp) protein (269aa)
hypothetical protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
R3H domain protein {ECO:0000313|EMBL:AIA11173.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Phage SPO1 DNA polymerase-related protein id=3850391 bin=GWC2_Alphaproteobacteria_42_16 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_cont_1000_p_scaffold_876_curated_24
unknown

Not on your lists

comp(18746..18874)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_25
unknown

Not on your lists

comp(18894..19370)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_26
unknown

Not on your lists

19635..19802
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_876_curated_27
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19875..20147)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVZ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL65825.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_876_curated_28

Not on your lists

comp(20313..21023)
DNA (711bp) protein (237aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA11171.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein COdytL_05942 id=3850388 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_cont_1000_p_scaffold_876_curated_29
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21001..21690)
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=3850385 bin=GWC2_Alphaproteobacteria_42_16 species=Rhizobium etli genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_876_curated_30
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

22038..23849
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037FB38E
Uncharacterized protein {ECO:0000313|EMBL:EYC28966.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy