ggKbase home page

SCNpilot_cont_1000_p_scaffold_5824_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5824_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67..222
DNA (156bp) protein (52aa)
ferredoxin n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003020563
Ferredoxin {ECO:0000313|EMBL:AIL13225.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ferredoxin-like
SCNpilot_cont_1000_p_scaffold_5824_curated_2

Not on your lists

comp(417..845)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DSH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE08851.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5824_curated_3
unknown

Not on your lists

comp(832..1014)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5824_curated_4
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(1132..1785)
DNA (654bp) protein (218aa)
Stackhouse genomic scaffold, scaffold_80 n=1 Tax=Chondrus crispus RepID=R7QRC3_CHOCR
Merozoite surface protein 2 {ECO:0000313|EMBL:BAD08414.1}; Flags: Fragment;; TaxID=5833 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Plasmodium falciparum.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5824_curated_5

Not on your lists

2041..4080
DNA (2040bp) protein (680aa)
hypothetical protein COdytL_08996 id=4908546 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKE09933.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5824_curated_6
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4026..5576
DNA (1551bp) protein (517aa)
Uncharacterized protein {ECO:0000313|EMBL:AIK96338.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein COdytL_08996 id=4908546 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ankyrin and tpr repeat domain-containing protein
SCNpilot_cont_1000_p_scaffold_5824_curated_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5681..5995)
DNA (315bp) protein (105aa)
Conjugal transfer protein TraD id=3886381 bin=GWC2_Alphaproteobacteria_42_16 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traD-A; conjugal transfer protein TraD
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_5824_curated_8
unknown

Not on your lists

6169..6552
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5824_curated_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6783..7268
DNA (486bp) protein (162aa)
MobA/MobL family protein id=4908915 bin=GWC2_Alphaproteobacteria_42_16 species=Rickettsia endosymbiont of Ixodes scapularis genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traA; conjugal transfer relaxase/helicase protein TraA
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Displaying 9 items

View Taxonomy