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SCNpilot_cont_1000_p_scaffold_3607_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3607_curated_1
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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460..834
DNA (375bp) protein (125aa)
Putative transposase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UD5_NITEU
Transposase {ECO:0000313|EMBL:AKH36735.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
transposase
SCNpilot_cont_1000_p_scaffold_3607_curated_2
unknown

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comp(1006..1269)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3607_curated_3
unknown

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comp(1330..1971)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3607_curated_4
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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comp(2514..4421)
DNA (1908bp) protein (636aa)
Conjugal transfer protein traG id=4908488 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Brucella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative DNA-binding protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
SCNpilot_cont_1000_p_scaffold_3607_curated_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4479..7406)
DNA (2928bp) protein (976aa)
hypothetical protein COdytL_11899 id=4756831 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traG; conjugative transfer protein traG; K12056 conjugal transfer mating pair stabilization protein TraG
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_3607_curated_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7547..8929)
DNA (1383bp) protein (461aa)
hypothetical protein COdytL_11894 id=4756830 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traH; protein TraH; K12072 conjugative transfer pilus assembly protein TraH
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_3607_curated_7

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comp(8926..9795)
DNA (870bp) protein (290aa)
TraF-like protein id=4756829 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE08837.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TraF-like protein; K12057 conjugal transfer pilus assembly protein TraF
SCNpilot_cont_1000_p_scaffold_3607_curated_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9792..10844)
DNA (1053bp) protein (351aa)
conjugative transfer protein TraN id=4756828 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
conjugative transfer protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Displaying 8 items

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