ggKbase home page

SCNpilot_cont_1000_p_scaffold_1889_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: 6371..7138

Top 3 Functional Annotations

Value Algorithm Source
Linear gramicidin dehydrogenase LgrE {ECO:0000313|EMBL:ERT06762.1}; EC=1.1.-.- {ECO:0000313|EMBL:ERT06762.1};; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 239.0
  • Bit_score: 213
  • Evalue 2.60e-52
gramicidin S biosynthesis protein (EC:3.1.2.-) similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 241.0
  • Bit_score: 195
  • Evalue 2.20e-47
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI00034A8446 similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 242.0
  • Bit_score: 214
  • Evalue 1.40e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lyngbya aestuarii → Lyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGACACAAAATAATTGGTACTTAGAATATAAGAAAAATCCAAATGCTTCTATAAGACTTTTTTGTTTTCATCACTCGGGTGGAGGAGCTACGGCGTACAATCCCTGGATAGAACAGCTTTCAAGCAACATTGAACTGATTGCTATTCAGCTCCCAGGAAGAGAAAATAGGTTTACAGAGCCTCTCACGAGTAACTTAAGCCATATTGTAAACAAATTAAGTGAAGGGTTTCAAATTTATAAACATAAGCCTTTTTTTGTGTTTGGGCATAGCCTTGGCGCTTTAATTTCCTTCGAGTTTATTAAAGCCATTTACCAATTATATGCTCTTTATCCTTGCCACATGATTGTCTCATCTACAAAGGCTCCTCATTTACCTTTTCGGATGAGGCACCTAAGTCATTTAGAAGATAAAGTATTAAAAGAAGAACTAAAAATCTATAATGGAATAGATGAACGTATACTCAATAATGATGAGCTTCTCGATTTGTTTTTGCCAATCATAAGAAGTGATTTCAGTATCTATGAACATTACTGTTATTCAAATTCTAAACCCTTACCTTGTGATATACTTGCCCTTTCTGGTAACCAGGACTCAACAGTTACCCAAGAAGAGATTTTAGCATGGTCAACATACACGACTGGAAAATTTGAGCACATGTCATTTTCTGGAGAGCACTTTTTTATAAAAGATCATCAAAAAAGAATTTTAGAAATCATCAACCAAATTGGAGACAACTTCACTCAACCGCAAATTATAAGAACTTAA
PROTEIN sequence
Length: 256
MTQNNWYLEYKKNPNASIRLFCFHHSGGGATAYNPWIEQLSSNIELIAIQLPGRENRFTEPLTSNLSHIVNKLSEGFQIYKHKPFFVFGHSLGALISFEFIKAIYQLYALYPCHMIVSSTKAPHLPFRMRHLSHLEDKVLKEELKIYNGIDERILNNDELLDLFLPIIRSDFSIYEHYCYSNSKPLPCDILALSGNQDSTVTQEEILAWSTYTTGKFEHMSFSGEHFFIKDHQKRILEIINQIGDNFTQPQIIRT*