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SCNpilot_expt_1000_bf_scaffold_483_curated

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_483_curated_1
Bacillus altitudinis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..1723)
DNA (1722bp) protein (574aa)
Dna binding protein n=1 Tax=Bacillus stratosphericus LAMA 585 RepID=M5R4F8_9BACI
Transposase {ECO:0000313|EMBL:KHG38671.1}; TaxID=293387 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus altitudinis.;"
transposase or phage integrase
SCNpilot_expt_1000_bf_scaffold_483_curated_2
unknown

Not on your lists

comp(1720..2208)
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_483_curated_3
unknown

Not on your lists

comp(2235..2999)
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_483_curated_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3227..4141)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000368C114
Transcriptional regulator {ECO:0000313|EMBL:EDP64670.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_483_curated_5
unknown

Not on your lists

comp(4145..4630)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_483_curated_6
unknown

Not on your lists

comp(4632..5531)
DNA (900bp) protein (300aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_483_curated_7
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5546..7384)
DNA (1839bp) protein (613aa)
Putative flagellar hook-associated protein 1, FlgK protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5P0_9BRAD
flgK; putative flagellar hook-associated protein 1, FlgK protein
Putative flagellar hook-associated protein 1, FlgK protein {ECO:0000313|EMBL:BAM88813.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_expt_1000_bf_scaffold_483_curated_8
unknown

Not on your lists

comp(7394..7813)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_483_curated_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7817..8200)
DNA (384bp) protein (128aa)
Flagellar protein FlgJ-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JKM8_9PROT
Flagellar protein FlgJ-like protein {ECO:0000313|EMBL:EKE75007.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
flagellar protein FlgJ-like protein
SCNpilot_expt_1000_bf_scaffold_483_curated_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9489)
DNA (1290bp) protein (430aa)
Flagellar P-ring protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JID5_9PROT
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
flgI; flagellar basal-body P-ring protein FlgI
SCNpilot_expt_1000_bf_scaffold_483_curated_11
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(9620..10318)
DNA (699bp) protein (233aa)
MIP family channel protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VI49_9CYAN
MIP family channel protein
Tax=RBG_13_Chloroflexi_53_26_curated
SCNpilot_expt_1000_bf_scaffold_483_curated_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10412..11419)
DNA (1008bp) protein (336aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYU6_9PROT
SCNpilot_expt_1000_bf_scaffold_483_curated_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11547..12416)
DNA (870bp) protein (290aa)
UPF0042 nucleotide-binding protein amb4396 id=4886531 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
glmZ(sRNA)-inactivating NTPase; K06958 UPF0042 nucleotide-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_1000_bf_scaffold_483_curated_14
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12542..14479
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037A488E
Putative glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:EDL60132.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
NAD+ synthetase
SCNpilot_expt_1000_bf_scaffold_483_curated_15
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14650..15750)
DNA (1101bp) protein (367aa)
Peptidase M23B n=1 Tax=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) RepID=Q2RTH8_RHORT
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABC22567.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_expt_1000_bf_scaffold_483_curated_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15761..16543)
DNA (783bp) protein (261aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMG9_9PROT
SCNpilot_expt_1000_bf_scaffold_483_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16536..17825)
DNA (1290bp) protein (430aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
serS; serine tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003678FEF
SCNpilot_expt_1000_bf_scaffold_483_curated_18
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17870..18646)
DNA (777bp) protein (259aa)
Sec-independent protein translocase protein TatC n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VH51_9PROT
Twin-arginine translocation protein TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_1000_bf_scaffold_483_curated_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18653..18913)
DNA (261bp) protein (87aa)
Sec-independent protein translocase protein TatB n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBX9_AZOL4
tatB; TatABCE protein translocation system subunit; K03117 sec-independent protein translocase protein TatB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_expt_1000_bf_scaffold_483_curated_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18922..19161)
DNA (240bp) protein (80aa)
Sec-independent protein translocase protein TatA n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2B1_AZOL4
tatE; Sec-independent protein translocase; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCNpilot_expt_1000_bf_scaffold_483_curated_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19189..19860)
DNA (672bp) protein (224aa)
Peptidase, M50 family {ECO:0000313|EMBL:KFC65972.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC65972.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
peptidase M48 n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BAE7
M50 family peptidase
SCNpilot_expt_1000_bf_scaffold_483_curated_22
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19877..20992)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RTG7_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC22578.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_expt_1000_bf_scaffold_483_curated_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20989..22728)
DNA (1740bp) protein (580aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CDK98253.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginyl-tRNA synthetase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F183_9PROT
SCNpilot_expt_1000_bf_scaffold_483_curated_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22725..23897)
DNA (1173bp) protein (391aa)
dNTP triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KD94_9PROT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_483_curated_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24000..24362
DNA (363bp) protein (121aa)
Iron-sulfur cluster insertion protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQU1_AZOBR
erpA; iron-sulfur cluster insertion protein
Iron-sulfur cluster insertion protein {ECO:0000313|EMBL:CCC99802.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_483_curated_26
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24372..25145
DNA (774bp) protein (258aa)
xth; exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
exodeoxyribonuclease III n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B742
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
SCNpilot_expt_1000_bf_scaffold_483_curated_27
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25146..26075)
DNA (930bp) protein (310aa)
ABC-type metal ion transport system, periplasmic component/surface adhesin n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V6T8_9RHOB
ABC-type metal ion transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:ERL98411.1}; Flags: Precursor;; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HIMB11.;"
Mn2+/Zn2+ ABC transporter periplasmic protein; K02077 zinc/manganese transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_483_curated_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26072..26947)
DNA (876bp) protein (292aa)
ABC-3 protein n=1 Tax=uncultured bacterium RepID=K2EGV0_9BACT
Zinc ABC transporter permease {ECO:0000313|EMBL:AIL13314.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC-3 protein; K02075 zinc/manganese transport system permease protein
SCNpilot_expt_1000_bf_scaffold_483_curated_29
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26940..27659)
DNA (720bp) protein (240aa)
ABC transporter related protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PTB2_9RHOO
mntA; ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:BAL26154.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_1000_bf_scaffold_483_curated_30
unknown

Not on your lists

comp(27677..27832)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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