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SCNpilot_expt_1000_bf_scaffold_1409_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1409_curated_1
unknown

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1409_curated_2
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

530..1003
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJQ9_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01120.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_expt_1000_bf_scaffold_1409_curated_3
unknown

Not on your lists

1077..1295
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1409_curated_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1796..3538)
DNA (1743bp) protein (581aa)
30S ribosomal protein S1 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AI20_AZOBR
30S ribosomal protein S1 {ECO:0000313|EMBL:EWY37599.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
rpsA; 30S ribosomal subunit protein S1
SCNpilot_expt_1000_bf_scaffold_1409_curated_5
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3670..4335)
DNA (666bp) protein (222aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CMP kinase {ECO:0000255|HAMAP-Rule:MF_00238};; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Cytidylate kinase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=KCY_MAGSA
SCNpilot_expt_1000_bf_scaffold_1409_curated_6
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4468..5439)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRU2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFI33408.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1409_curated_7
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5692..6036
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F684_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJV09113.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1409_curated_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6113..6820
DNA (708bp) protein (236aa)
Response regulator receiver:Transcriptional regulatory protein, C-terminal n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0Z6_9PROT
Response regulator receiver:Transcriptional regulatory protein, C-terminal {ECO:0000313|EMBL:CAM76553.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ompR; transcriptional regulatory protein OmpR; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR
SCNpilot_expt_1000_bf_scaffold_1409_curated_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6817..8187
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Signal tranduction histidine kinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARE9_AZOBR
signal tranduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_1409_curated_10
unknown

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8226..8495
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1409_curated_11
unknown

Not on your lists

8514..8699
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1409_curated_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8724..9905)
DNA (1182bp) protein (394aa)
Acetyl-CoA C-acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acyl-CoA thiolase n=1 Tax=Thauera sp. 28 RepID=N6YJG9_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_expt_1000_bf_scaffold_1409_curated_13
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9925..11091)
DNA (1167bp) protein (389aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNS9_TISMK
isovaleryl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_1000_bf_scaffold_1409_curated_14
unknown

Not on your lists

comp(11127..11732)
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1409_curated_15
unknown

Not on your lists

comp(11940..12296)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1409_curated_16
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12376..12939)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003747D14
Putative Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:CCQ72285.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
SCNpilot_expt_1000_bf_scaffold_1409_curated_17
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13066..13692)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AK88_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJV09205.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1409_curated_18
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13699..14637)
DNA (939bp) protein (313aa)
SAM-dependent methyltransferase n=1 Tax=Myxococcus xanthus RepID=G0LWU9_MYXXA
Uncharacterized protein {ECO:0000313|EMBL:AIL65406.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1409_curated_19
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14880..15764)
DNA (885bp) protein (295aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8U6_THEID
Methyltransferase {ECO:0000313|EMBL:AIF81297.1}; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC8.;"
SCNpilot_expt_1000_bf_scaffold_1409_curated_20
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15899..16420)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:977 RepID=R5Q8W8_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Displaying 20 items

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