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SCNpilot_expt_1000_bf_scaffold_614_curated_13

Organism: scnpilot_dereplicated_Alphaproteobacteria_9

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 13377..14330

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 318.0
  • Bit_score: 259
  • Evalue 2.00e-66
Pseudouridine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HMR8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 317.0
  • Bit_score: 264
  • Evalue 2.00e-67
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 319.0
  • Bit_score: 267
  • Evalue 3.20e-68

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Taxonomy

RIFOXYD12_FULL_Rhodospirillales_60_8_curated → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGTAGAACATCATATCGTAACCGAAGAAGACGATGACATCCGCATTGATCGGTGGTTTAAAAGACACCACCCAAACCTACCTTTTGGCCAAGTCGCTAAACTACTGCGTACAGGACAAGTTCGCTTGGACGGCAAGCGTGTTGATGCCAGTGACCGCATTCACACAGGTCAATCAATCAGATTGCCCCCTGGCCATTTACTCGAAGCACCTCCTGCCTATCAAAAACCAGATGCAGCCCGTAAACAAGCGGCCCTCAACCTAAAACCTCTGATTTTGTATGAAAACGAATCCATCATCGCCATAAATAAGCCCCAAGGTTTAGCTACTCAAGGTGGTTCAGGGGTGAAGACATCCATTGATGATTATCTCAAAAACTACAACGAAGAGCATGGGCTAAAACTCAAGCTGATCCATCGTTTGGATAAAGATACCAGCGGCCTGCTTATTTTGGCCAAAGGGGCTAAGTACGCCGACCAATGGATGAAGCAATTTCAATCTAAATCTGTGGAAAAAACCTACGTGGCAATTTTATGTGGTTACCCATCAAAGCCATCCGGGGTTTTAAAATTCCCACTACTTAAGATGACGATCCGAGGCCAGGAAAAAATGGCCGTTCACGAAGAAGGGCAAAAGGCCGAGACGGAATATGAGATCATTGATCATGTAGGCAAGAATTTATCCTTAGCCATCCTAACACCACGCACCGGACGGACCCATCAGCTGCGTGTCCACTGCGCACACATAGGGCACCCTATCTTGGGCGATGGGAAATATGGTGGCGATATTGAACAAGGCCTTGGGCAAAAATTTAAGCTGCACTTGCATGCTTGGAAGATATCGATTTTGAACCCTAAGCCCCTCACCATTTCAGCGCCCTTGCCACAAGAATTTTTAAATACCTGTAAAGAATTTGGCCTGGATGATTCACTTTTTAAGCCTAGAAGAAAATAG
PROTEIN sequence
Length: 318
MVEHHIVTEEDDDIRIDRWFKRHHPNLPFGQVAKLLRTGQVRLDGKRVDASDRIHTGQSIRLPPGHLLEAPPAYQKPDAARKQAALNLKPLILYENESIIAINKPQGLATQGGSGVKTSIDDYLKNYNEEHGLKLKLIHRLDKDTSGLLILAKGAKYADQWMKQFQSKSVEKTYVAILCGYPSKPSGVLKFPLLKMTIRGQEKMAVHEEGQKAETEYEIIDHVGKNLSLAILTPRTGRTHQLRVHCAHIGHPILGDGKYGGDIEQGLGQKFKLHLHAWKISILNPKPLTISAPLPQEFLNTCKEFGLDDSLFKPRRK*