name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_614_curated_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(420..893)
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Outer membrane lipoprotein omp16 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITH8_RHOCS
omp16; outer membrane lipoprotein omp16; K03640 peptidoglycan-associated lipoprotein
Outer membrane lipoprotein omp16 {ECO:0000313|EMBL:ACI99196.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
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SCNpilot_expt_1000_bf_scaffold_614_curated_2
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1102..2439)
|
Protein TolB n=1 Tax=Oceanibaculum indicum P24 RepID=K2IY00_9PROT
tolB; translocation protein TolB; K03641 TolB protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_3
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2780..4414
|
ABC transporter ATPase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B43A
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4517..5356
|
Putative carboxylesterase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARC4_AZOBR
putative carboxylesterase
Putative carboxylesterase {ECO:0000313|EMBL:CCC99985.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_5
unknown
|
Not on your lists |
5854..6507
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_614_curated_6
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
6607..7410
|
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=2 Tax=Brevibacillus RepID=J2IBT1_9BACL
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL46133.1}; Flags: Precursor;; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
artP; arginine ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7430..8083
|
arginine ABC transporter permease n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BEA9
Arginine ABC transporter permease {ECO:0000313|EMBL:AIL13038.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_8
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
8080..8814
|
Arginine ABC transporter ATP-binding protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZFY5_BREBN
artM; arginine ABC transporter ATP-binding protein
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH44694.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599).;"
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SCNpilot_expt_1000_bf_scaffold_614_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9340..9747
|
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXJ4_9PROT
sdhD; Succinate dehydrogenase, hydrophobic membrane anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_10
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9751..11541
|
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2IMY8_9PROT
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_11
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11549..12331
|
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A0R6_9PROT
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_12
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12328..13383
|
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000382F178
AFG1 family ATPase; K06916
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_13
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13377..14330
|
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Pseudouridine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HMR8_9SPHN
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_14
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14299..14958
|
Chaperone n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LBX2_9PROT
Chaperone {ECO:0000313|EMBL:EKF06430.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_15
unknown
|
Not on your lists |
comp(14993..15595)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_614_curated_16
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15822..16397)
|
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002EA2D20
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AKH20877.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
wrbA; nadph-dependent fmn reductase
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16463..16933)
|
Putative outer membrane lipoprotein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMQ7_AZOBR
putative outer membrane lipoprotein
Membrane protein SmpA {ECO:0000313|EMBL:AIB11557.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_18
unknown
|
Not on your lists |
17150..17659
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_614_curated_19
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria
|
Not on your lists |
comp(17722..18117)
|
cdd cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cdd cytidine deaminase n=1 Tax=Thermosipho africanus (strain TCF52B) RepID=B7IDX9_THEAB
Cdd cytidine deaminase {ECO:0000313|EMBL:ACJ76206.1}; TaxID=484019 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus (strain TCF52B).;"
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_20
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18220..18462
|
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB61_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48809.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
BolA family protein
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18483..18809
|
Glutaredoxin n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVT6_9PROT
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
monothiol glutaredoxin; K07390 monothiol glutaredoxin
|
|
SCNpilot_expt_1000_bf_scaffold_614_curated_22
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18806..19342)
|
Peptide deformylase id=4756840 bin=GWC2_Alphaproteobacteria_42_16 species=Methylobacillus flagellatus genus=Methylobacillus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19552..20094
|
Cytochrome c homolog n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SUU3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AIL12437.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
cytochrome c homolog
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_24
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(20104..21777)
|
Tax=GWC2_Verrucomicrobia_42_7_curated
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_25
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22054..22815
|
2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=2 Tax=Rhodospirillum rubrum RepID=Q2RMQ3_RHORT
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_26
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria
|
Not on your lists |
22824..23285
|
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23]
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXR2_9AQUI
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_27
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23440..24837)
|
2-nitropropane dioxygenase (EC:1.13.12.16)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EHA9_9BACT
2-nitropropane dioxygenase {ECO:0000313|EMBL:EWY42422.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24875..26968)
|
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYM2_AZOS1
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_29
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27034..27303)
|
30S ribosomal protein S15 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFH2_AZOBR
rpsO; 30S ribosomal subunit protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
|
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SCNpilot_expt_1000_bf_scaffold_614_curated_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27293..28198)
|
truB; tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgens
tRNA pseudouridine synthase B n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS62_NITHX
|