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SCNpilot_cont_300_bf_scaffold_4926_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4926_curated_1
unknown

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comp(1..279)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4926_curated_2
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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683..1135
DNA (453bp) protein (151aa)
Glyoxalase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SDG5_PSEME
Glyoxalase {ECO:0000313|EMBL:EZH84338.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_4926_curated_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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1161..1778
DNA (618bp) protein (206aa)
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR37_PARL1
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:GAK46819.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_cont_300_bf_scaffold_4926_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1760..2233)
DNA (474bp) protein (158aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; EC=1.7.1.13 {ECO:0000255|HAMAP-Rule:MF_00818};; 7-cyano-7-carbaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000255|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000255|HAMAP-Rule:MF_00818}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 139
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=QUEF_PARL1
SCNpilot_cont_300_bf_scaffold_4926_curated_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2235..2591)
DNA (357bp) protein (119aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003759BF5
SCNpilot_cont_300_bf_scaffold_4926_curated_6
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2805..3125
DNA (321bp) protein (107aa)
Small multidrug resistance protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZX5_9GAMM
Multidrug transporter {ECO:0000313|EMBL:KGO99022.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
putative multidrug resistance protein/chaperone; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_cont_300_bf_scaffold_4926_curated_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3139..3687)
DNA (549bp) protein (183aa)
peroxiredoxin n=1 Tax=Nevskia ramosa RepID=UPI0003B4576C
Peroxiredoxin {ECO:0000313|EMBL:AJF00106.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
antioxidant, AhpC/TSA family protein
SCNpilot_cont_300_bf_scaffold_4926_curated_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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3982..4539
DNA (558bp) protein (186aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=ATPD_PARL1
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
SCNpilot_cont_300_bf_scaffold_4926_curated_9
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4352..5344)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NUS5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV43677.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4926_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5578..6015
DNA (438bp) protein (146aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QJ09_BREDI
SCNpilot_cont_300_bf_scaffold_4926_curated_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6032..6901
DNA (870bp) protein (290aa)
atpG; ATP synthase F0F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPG_PHEZH rbh
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_4926_curated_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6921..7307
DNA (387bp) protein (129aa)
atpD; ATP synthase F0F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
ATP synthase subunit beta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD47_PHEZH
Displaying 12 items

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