ggKbase home page

SCNpilot_cont_300_bf_scaffold_6491_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6491_curated_1

Not on your lists

comp(3..536)
DNA (534bp) protein (178aa)
serine protease DO-like protein; K01362 [EC:3.4.21.-]
Serine protease DO-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2B5_POLGS
Trypsin-like peptidase domain protein {ECO:0000313|EMBL:AIA18663.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_6491_curated_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(786..1661)
DNA (876bp) protein (292aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Protein HflC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVY5_PARL1
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_6491_curated_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1658..2833)
DNA (1176bp) protein (392aa)
hflK; HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
HflK protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RWA4_9RHIZ
HflK protein {ECO:0000313|EMBL:ESR27300.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCNpilot_cont_300_bf_scaffold_6491_curated_4

Not on your lists

2897..4057
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVY3_PARL1
ParA/MinD ATPase like {ECO:0000313|EMBL:AIA17706.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning
SCNpilot_cont_300_bf_scaffold_6491_curated_5
unknown

Not on your lists

4070..4255
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_curated_6
unknown

Not on your lists

comp(4298..4957)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_curated_7
unknown

Not on your lists

5269..6219
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B42440
SCNpilot_cont_300_bf_scaffold_6491_curated_8
unknown

Not on your lists

6406..6750
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_curated_9

Not on your lists

comp(6865..7725)
DNA (861bp) protein (287aa)
SMP-30/gluconolaconase/LRE domain-containing protein; K01053 gluconolactonase [EC:3.1.1.17]
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003664D61
SMP-30/Gluconolaconase/LRE-like region {ECO:0000313|EMBL:AIA15429.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_6491_curated_10
unknown

Not on your lists

7915..8520
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6491_curated_11
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8517..9077
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E060
Uncharacterized protein {ECO:0000313|EMBL:EGD59002.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6491_curated_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9139..9933)
DNA (795bp) protein (265aa)
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Thymidylate synthase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7E1_STAND
Displaying 12 items

View Taxonomy