ggKbase home page

SCNpilot_cont_300_bf_scaffold_3612_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3612_curated_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436..1737)
-----------------
DNA (1302bp)
protein (434aa)
Permease of the major facilitator superfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGU4_PHEZH
major facilitator superfamily permease
Permease of the major facilitator superfamily {ECO:0000313|EMBL:ACG77310.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_3612_curated_2
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1776..3068)
-----------------
DNA (1293bp)
protein (431aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7UVG1_9DELT
major facilitator superfamily permease
Tax=CG_Desulfovib_01
SCNpilot_cont_300_bf_scaffold_3612_curated_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..4294
-----------------
DNA (1110bp)
protein (370aa)
2,4-dienoyl-CoA reductase [NADPH] {ECO:0000313|EMBL:CDO61124.1}; EC=1.3.1.34 {ECO:0000313|EMBL:CDO61124.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG36_9BRAD
NADH:flavin oxidoreductase
SCNpilot_cont_300_bf_scaffold_3612_curated_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4491..5051
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVZ1_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:AIB12153.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein; K09985 hypothetical protein
SCNpilot_cont_300_bf_scaffold_3612_curated_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5105..5383
-----------------
DNA (279bp)
protein (93aa)
Plasmid stability protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N3N3_RHILT
StbC superfamily plasmid stability protein {ECO:0000313|EMBL:AJC81789.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
putative plasmid stability protein
SCNpilot_cont_300_bf_scaffold_3612_curated_6
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5380..5805
-----------------
DNA (426bp)
protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Plasmid stability protein StbB n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HQ30_RHOCA
PilT protein-like protein; K07062
SCNpilot_cont_300_bf_scaffold_3612_curated_7
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5676..6065)
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FH14_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU43488.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
SCNpilot_cont_300_bf_scaffold_3612_curated_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6762..7193
-----------------
DNA (432bp)
protein (144aa)
fumC; fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
fumarate hydratase n=1 Tax=Kaistia granuli RepID=UPI00037DF153
SCNpilot_cont_300_bf_scaffold_3612_curated_9
unknown

Not on your lists

comp(7130..7285)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3612_curated_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7354..8097
-----------------
DNA (744bp)
protein (248aa)
Spermidine synthase family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6H3_9RHIZ
Spermidine synthase family protein {ECO:0000313|EMBL:EHH12663.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
spermidine synthase family protein
Displaying 10 items

View Taxonomy