ggKbase home page

SCNpilot_cont_300_bf_scaffold_1873_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1873_curated_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..882
DNA (882bp) protein (294aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLR1_AFIFE
SCNpilot_cont_300_bf_scaffold_1873_curated_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

985..1455
DNA (471bp) protein (157aa)
UPI0003CF67A9 related cluster n=1 Tax=unknown RepID=UPI0003CF67A9
Transcriptional regulator {ECO:0000313|EMBL:ESW81023.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1873_curated_3
unknown

Not on your lists

1465..1884
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1873_curated_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2035..2619)
DNA (585bp) protein (195aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6L2_9PROT
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EWY37041.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
meaD; ATP:cob(I)alamin adenosyltransferase
SCNpilot_cont_300_bf_scaffold_1873_curated_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2728..2964
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC83_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79876.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1873_curated_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2961..5885
DNA (2925bp) protein (975aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I {ECO:0000313|EMBL:ABS61728.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABS61728.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
DNA polymerase I n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP95_PARL1
SCNpilot_cont_300_bf_scaffold_1873_curated_7
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5897..6700)
DNA (804bp) protein (268aa)
Molybdopterin biosynthesis protein n=2 Tax=Rhodospirillum rubrum RepID=G2TH44_RHORU
molybdopterin biosynthesis protein
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:ABC24587.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_300_bf_scaffold_1873_curated_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6977..8587
DNA (1611bp) protein (537aa)
phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000255|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000255|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000255|HAMAP-Rule:MF_00453};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=PCKA_PARL1 rbh
SCNpilot_cont_300_bf_scaffold_1873_curated_9
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8679..9263)
DNA (585bp) protein (195aa)
Phospholipid N-methyltransferase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YNT5_9RHIZ
Phospholipid N-methyltransferase {ECO:0000313|EMBL:EMS42045.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
phospholipid N-methyltransferase
SCNpilot_cont_300_bf_scaffold_1873_curated_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9413..10135
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQ93_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34581.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 10 items

View Taxonomy