ggKbase home page

SCNpilot_cont_300_bf_scaffold_2990_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2990_curated_1
unknown

Not on your lists

comp(2..244)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2990_curated_2
unknown

Not on your lists

708..1289
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2990_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2700..3839)
DNA (1140bp) protein (380aa)
putative membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-]
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Putative membrane-associated zinc metalloprotease n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INQ9_XANP2
SCNpilot_cont_300_bf_scaffold_2990_curated_4
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3881..5125)
DNA (1245bp) protein (415aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4L9_AZOL4
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_cont_300_bf_scaffold_2990_curated_5
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5122..6003)
DNA (882bp) protein (294aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
CDP-diglyceride synthetase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FRA8_PHAMO
SCNpilot_cont_300_bf_scaffold_2990_curated_6
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6000..6740)
DNA (741bp) protein (247aa)
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
Isoprenyl transferase n=3 Tax=Agrobacterium RepID=F0L366_AGRSH
SCNpilot_cont_300_bf_scaffold_2990_curated_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6764..6946)
DNA (183bp) protein (61aa)
ribosome recycling factor n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5F390
Ribosome recycling factor {ECO:0000313|EMBL:ESR23465.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
frr; ribosome recycling factor; K02838 ribosome recycling factor
Displaying 7 items

View Taxonomy