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SCNpilot_cont_300_bf_scaffold_3393_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3393_curated_1
unknown

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1..165
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3393_curated_2
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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229..1599
DNA (1371bp) protein (457aa)
Aminotransferase, class III n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RM39_9RHIZ
Aminotransferase, class III {ECO:0000313|EMBL:ESR27081.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
class III aminotransferase
SCNpilot_cont_300_bf_scaffold_3393_curated_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1661..1996
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000363FEBD
Transcriptional regulator {ECO:0000313|EMBL:KIF35006.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transcription regulator
SCNpilot_cont_300_bf_scaffold_3393_curated_4
Erwinia pyrifoliae, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1953..2273
DNA (321bp) protein (107aa)
Plasmid stabilization system protein n=1 Tax=Erwinia sp. (strain Ejp617) RepID=E3DGW1_ERWSE
plasmid stabilization system protein
Uncharacterized protein {ECO:0000313|EMBL:CAY75922.1}; TaxID=644651 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96).;"
SCNpilot_cont_300_bf_scaffold_3393_curated_5
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2437..3054
DNA (618bp) protein (206aa)
sodB; manganese and iron superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414, ECO:0000313|EMBL:CAD84781.1};; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Superoxide dismutase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W28_NITEU
SCNpilot_cont_300_bf_scaffold_3393_curated_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3166..4323
DNA (1158bp) protein (386aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDO60172.2}; EC=1.3.8.1 {ECO:0000313|EMBL:CDO60172.2};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DFD8_9RHIZ
SCNpilot_cont_300_bf_scaffold_3393_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4327..4782)
DNA (456bp) protein (152aa)
PilT-like protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T505_CAUSK
PilT-like protein
PilT-like protein {ECO:0000313|EMBL:ABZ72532.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3393_curated_8
unknown

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comp(4775..5038)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3393_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5143..6039
DNA (897bp) protein (299aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ABJ06246.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABJ06246.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Enoyl-CoA hydratase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07P88_RHOP5
enoyl-CoA hydratase
SCNpilot_cont_300_bf_scaffold_3393_curated_10

Not on your lists

comp(6237..7112)
DNA (876bp) protein (292aa)
Uroporphyrinogen-III methyltransferase n=1 Tax=uncultured bacterium BLR7 RepID=C0INN2_9BACT
Uroporphyrinogen-III methyltransferase {ECO:0000313|EMBL:ACN58918.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
uroporphyrin-III C-methyltransferase
SCNpilot_cont_300_bf_scaffold_3393_curated_11
unknown

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comp(7263..8360)
DNA (1098bp) protein (366aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3393_curated_12

Not on your lists

8506..8769
DNA (264bp) protein (88aa)
phosphoglucomutase/phosphomannomutase subunit alpha/beta; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphoglucosamine mutase n=1 Tax=uncultured bacterium BLR9 RepID=C0INB9_9BACT
Phosphoglucosamine mutase {ECO:0000313|EMBL:ACN58805.1}; TaxID=506525 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR9.;"
SCNpilot_cont_300_bf_scaffold_3393_curated_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8918..9097
DNA (180bp) protein (60aa)
iron-binding protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4E7A9
CDGSH-type domain-containing protein
Tax=RBG_16_Gamma2_65_34_curated
SCNpilot_cont_300_bf_scaffold_3393_curated_14
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9176..9565
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5EYU1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV10282.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3393_curated_15
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9585..10637)
DNA (1053bp) protein (351aa)
Methyltransferase type 12 n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K2E0_9MYCO
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDO26325.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_cont_300_bf_scaffold_3393_curated_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10772..11605)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYS7_AZOBR
Membrane protein {ECO:0000313|EMBL:AIB16139.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
conserved membrane protein of unknown function
SCNpilot_cont_300_bf_scaffold_3393_curated_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11609..12565)
DNA (957bp) protein (319aa)
tim-barrel protein, yjbn family; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
tRNA-dihydrouridine synthase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YXE1_9CAUL
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_300_bf_scaffold_3393_curated_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12623..14227)
DNA (1605bp) protein (535aa)
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV87_PARL1
acyl-CoA synthetase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS63820.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_3393_curated_19
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14441..15973
DNA (1533bp) protein (511aa)
enoyl-CoA hydratase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026289A4
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KIZ19990.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
SCNpilot_cont_300_bf_scaffold_3393_curated_20
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15997..16722)
DNA (726bp) protein (242aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:ACI98835.1}; EC=2.7.8.8 {ECO:0000313|EMBL:ACI98835.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT77_RHOCS
SCNpilot_cont_300_bf_scaffold_3393_curated_21
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16790..17545)
DNA (756bp) protein (252aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SV39_9RHOB
SCNpilot_cont_300_bf_scaffold_3393_curated_22
unknown

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comp(17575..18000)
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying 22 items

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