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SCNpilot_cont_300_bf_scaffold_4454_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4454_curated_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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121..1038
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRJ2_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62525.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_4454_curated_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1088..1360
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRJ2_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62525.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_4454_curated_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1364..2548
DNA (1185bp) protein (395aa)
Phage portal protein, HK97 family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5F7_9BRAD
Phage portal protein, HK97 family {ECO:0000313|EMBL:CEG08478.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phage portal protein, HK97 family
SCNpilot_cont_300_bf_scaffold_4454_curated_4
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2545..2817
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E5E6_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:KCZ95748.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschiana VP5.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4454_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2814..3356
DNA (543bp) protein (181aa)
Phage prohead protease, HK97 family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVN5_HYPDA
phage prohead protease HK97 family; K06904
Phage prohead protease, HK97 family {ECO:0000313|EMBL:ADJ22924.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_300_bf_scaffold_4454_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3374..4630
DNA (1257bp) protein (419aa)
Phage major capsid protein, HK97 family n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B785_9RHIZ
phage major capsid protein, HK97 family
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:AGK58097.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_300_bf_scaffold_4454_curated_7
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4793..5341
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039F9D27
Gene Transfer Agent (GTA) ORFG06 {ECO:0000313|EMBL:BAQ18001.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
phiE125 gp8 hypothetical protein
SCNpilot_cont_300_bf_scaffold_4454_curated_8
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5338..5652
DNA (315bp) protein (105aa)
Head-tail adaptor, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJX5_9RHOB
Head-tail adaptor, putative {ECO:0000313|EMBL:EAP77656.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
SCNpilot_cont_300_bf_scaffold_4454_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5649..6059
DNA (411bp) protein (137aa)
Homologue of Rhodobacter capsulatus gene transfer agent (GTA) orfg8 (32% identity) n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N8K5_RHOPA
GTA; hypothetical protein
Homologue of Rhodobacter capsulatus gene transfer agent (GTA) orfg8 (32% identity) {ECO:0000313|EMBL:CAE27339.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_300_bf_scaffold_4454_curated_10
unknown

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6072..6194
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 10 items

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